RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 BPHLQ86WA6 291 aaPredicted RBP16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 KHSRPQ92945 711 aaKnown RBP eCLIP16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 NMNAT2Q9BZQ4 307 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 SURF4O15260 269 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 TNFSF12O43508 249 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 SCG5P05408 212 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 FBXO45P0C2W1 286 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 OR2T7P0C7T2 308 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 VIPR2P41587 438 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 OR2T27Q8NH04 317 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 FCRL1Q96LA6 429 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 AMDHD1Q96NU7 426 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 C1orf198Q9H425 327 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ARNT2Q9HBZ2 717 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ANGPTL7O43827 346 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 PRDX3P30048 256 aaKnown RBP16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ETV1P50549 477 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 P2RX1P51575 399 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 NDUFAF7Q7L592 441 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 RAD1O60671 282 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC14A1Q13336 389 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 SELPLGQ14242 412 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 GGTA1PQ4G0N0 100 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 NLGN4YQ8NFZ3 816 aaPredicted RBP16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 MICU1Q9BPX6 476 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 EGLN3Q9H6Z9 239 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 BCKDHBP21953 392 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 FBXW12Q6X9E4 464 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 MMP21Q8N119 569 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 TMEM269A0A1B0GVZ9 245 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 TMX2-CTNND1H3BSU7 103 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 FADS1O60427 444 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 KCNK2O95069 426 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 IMPA1P29218 277 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ARL16Q0P5N6 197 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 PIANPQ8IYJ0 282 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 PRR22Q8IZ63 422 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 FIZ1Q96SL8 496 aa16.3■□□□□ 0.2
NOTCH3-201ENST00000263388 ADAM23O75077 832 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 DBHP09172 617 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 EMP2P54851 167 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 C5orf46Q6UWT4 87 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 TCEAL8Q8IYN2 117 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 CCNL2Q96S94 520 aaPredicted RBP16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 UQCC2Q9BRT2 126 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 TAS2R16Q9NYV7 291 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PRSS38A1L453 326 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 METTL15P1P0C7V9 234 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC2A1P11166 492 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 POU3F2P20265 443 aaPredicted RBP16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 EPHA4P54764 986 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 RPS18P62269 152 aaKnown RBP16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 NAA40Q86UY6 237 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 OR56B1Q8NGI3 324 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ACKR4Q9NPB9 350 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ADAM29Q9UKF5 820 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 FRS3O43559 492 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 EEF1A2Q05639 463 aaKnown RBP16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF789Q5FWF6 425 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 FRMPD2BQ6IN97 320 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 HTR3DQ70Z44 454 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 COPS3Q9UNS2 423 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 TMEM184AQ6ZMB5 413 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 LRP5LA4QPB2 252 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SDC3O75056 442 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ICAM2P13598 275 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 TNK1Q13470 666 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PLK5Q496M5 336 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PIWIL3Q7Z3Z3 882 aaKnown RBP16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 OCSTAMPQ9BR26 566 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 LOC105369274A0A096LPK9 316 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PRAMEF27A3QJZ7 478 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 BTBD17A6NE02 478 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 FAM183AA6NL82 134 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 RFXAPO00287 272 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 CCR7P32248 378 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC5A12Q1EHB4 618 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 CTSL3PQ5NE16 218 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 PRAMEF9Q5VWM5 478 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 HBMQ6B0K9 141 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 OR4N4Q8N0Y3 316 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SLC43A2Q8N370 569 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 OR52E1Q8NGJ3 308 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 SLCO5A1Q9H2Y9 848 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 ELOVL3Q9HB03 270 aa16.29■□□□□ 0.2
NOTCH3-201ENST00000263388 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 CEBPZOSA8MTT3 80 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 HLA-DOBP13765 273 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 UBE2G2P60604 165 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 BPIFB2Q8N4F0 458 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 GPR26Q8NDV2 337 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 OR4Q3Q8NH05 313 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 TIMM29Q9BSF4 260 aa16.28■□□□□ 0.2
NOTCH3-201ENST00000263388 LIN7BQ9HAP6 207 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms