RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SPATA3Q8NHX4 192 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SLC25A36Q96CQ1 311 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ITCHQ96J02 903 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 VRK1Q99986 396 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SF3B5Q9BWJ5 86 aaKnown RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 C20orf27Q9GZN8 174 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 WDR55Q9H6Y2 383 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 THUMPD1Q9NXG2 353 aaKnown RBP10.75□□□□□ -0.69
TRAF4-202ENST00000262396 SELENONQ9NZV5 590 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ADAM21Q9UKJ8 722 aa10.75□□□□□ -0.69
TRAF4-202ENST00000262396 ZC3H12DA2A288 527 aaKnown RBP10.74□□□□□ -0.69
TRAF4-202ENST00000262396 OR6C65A6NJZ3 312 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 A8MVM7 634 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 SDHDO14521 159 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 VAMP5O95183 116 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 CRYAAP02489 173 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 ERCC1P07992 297 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-202ENST00000262396 ALDOCP09972 364 aaKnown RBP10.74□□□□□ -0.69
TRAF4-202ENST00000262396 ETFAP13804 333 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 PDLIM4P50479 330 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 EFNA4P52798 201 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 STX1BP61266 288 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 BNIP2Q12982 314 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 C1DQ13901 141 aaKnown RBP10.74□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM249Q2WGJ8 235 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 IQCCQ4KMZ1 466 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 COX20Q5RI15 118 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 CYB5R2Q6BCY4 276 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 NIPAL3Q6P499 406 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 SEZ6L2Q6UXD5 910 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 VRK2Q86Y07 508 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 HIPK1Q86Z02 1210 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM158Q8WZ71 300 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 TEX37Q96LM6 180 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 TNFRSF13CQ96RJ3 184 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 SHARPINQ9H0F6 387 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 RAD21L1Q9H4I0 556 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 RLIMQ9NVW2 624 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 CDC42EP3Q9UKI2 254 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 MOKQ9UQ07 419 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF443Q9Y2A4 671 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-202ENST00000262396 IFT52Q9Y366 437 aa10.74□□□□□ -0.69
TRAF4-202ENST00000262396 A0A096LPI6 279 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 PRAMEF27A3QJZ7 478 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 LIPT2A6NK58 231 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ELOA3DA6NLF2 546 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ATP6V1G2-DDX39BF2Z307 99 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 FAAHO00519 579 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 GPRIN2O60269 458 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 PAX7P23759 505 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 CAPZA2P47755 286 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 FOXG1P55316 489 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-202ENST00000262396 NCALDP61601 193 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 GGTLC2Q14390 218 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ELOA3BQ3SY89 546 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF311Q5JNZ3 666 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 C1QTNF12Q5T7M4 302 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 C1orf140Q5VVS0 124 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF836Q6ZNA1 936 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 ELOA3Q8NG57 546 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM45BQ96B21 275 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 C3orf49Q96BT1 292 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 PIMREGQ9BSJ6 248 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 AMBRA1Q9C0C7 1298 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 OBP2BQ9NPH6 170 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 HAO1Q9UJM8 370 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 SLC13A4Q9UKG4 626 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 PRDM4Q9UKN5 801 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 RASD1Q9Y272 281 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 GPR45Q9Y5Y3 372 aa10.73□□□□□ -0.69
TRAF4-202ENST00000262396 FREM1Q5H8C1 2179 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 PRR14LQ5THK1 2151 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 TMEM120BA0PK00 339 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 CDHR4A6H8M9 788 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 AQP7P3A6NL99 342 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 HNRNPCL2B2RXH8 293 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 H7C417 338 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 UBDO15205 165 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 AKAP8O43823 692 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 HNRNPCL1O60812 293 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 LGI1O95970 557 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 ZNF43P17038 809 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 HNF1AP20823 631 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 USF1P22415 310 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 IL12AP29459 219 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 POLR2JP52435 117 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 H3F3AP84243 136 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 KRTAP1-1Q07627 177 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 PDCD4Q53EL6 469 aaKnown RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 RPS26P11Q5JNZ5 115 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-202ENST00000262396 C6orf52Q5T4I8 152 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 C11orf71Q6IPW1 123 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 B3GLCTQ6Y288 498 aa10.72□□□□□ -0.69
TRAF4-202ENST00000262396 MIER2Q8N344 545 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms