RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SCP2D1Q9UJQ7 156 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LIPT1Q9Y234 373 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 VCANP13611 3396 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 M0R036 132 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 PIPP12273 146 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 IRF4Q15306 451 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 KIAA0907Q7Z7F0 614 aaPredicted RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 SFTPA2Q8IWL1 248 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 LINC01555Q8NAE3 123 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR5AK2Q8NH90 309 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 OR5K2Q8NHB8 316 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 TMEM41AQ96HV5 264 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 RADILQ96JH8 1075 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 MAN2C1Q9NTJ4 1040 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 B3GNT2Q9NY97 397 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 V9GY05 133 aa9.34□□□□□ -0.91
PALB2-201ENST00000261584 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
PALB2-201ENST00000261584 METTL12A8MUP2 240 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 GPR89AB7ZAQ6 455 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 F5H5P2 479 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 F8W036 122 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 FADS1O60427 444 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 HTR3BO95264 441 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 GPR89BP0CG08 455 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 CDK2P24941 298 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 PXNP49023 591 aaPredicted RBP9.34□□□□□ -0.92
PALB2-201ENST00000261584 ARRB1P49407 418 aaPredicted RBP9.34□□□□□ -0.92
PALB2-201ENST00000261584 BLOC1S1P78537 153 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 ITPRIPL2Q3MIP1 535 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 ABHD17CQ6PCB6 329 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 MBOAT2Q6ZWT7 520 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 KCTD20Q7Z5Y7 419 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 BRIX1Q8TDN6 353 aaKnown RBP9.34□□□□□ -0.92
PALB2-201ENST00000261584 METTL21AQ8WXB1 218 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 APOBEC3BQ9UH17 382 aaKnown RBP9.34□□□□□ -0.92
PALB2-201ENST00000261584 TRAPPC4Q9Y296 219 aa9.34□□□□□ -0.92
PALB2-201ENST00000261584 FBXO24O75426 580 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ATG12O94817 140 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 KAT7O95251 611 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 CYB5AP00167 134 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TMIGD3P0DMS9 266 aaPredicted RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 F3P13726 295 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 PKLRP30613 574 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ILF3Q12906 894 aaKnown RBP eCLIP9.33□□□□□ -0.926e-11■■■■□ 20.3
PALB2-201ENST00000261584 PDE7AQ13946 482 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TMEM44Q2T9K0 475 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 EXOSC6Q5RKV6 272 aaKnown RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 CARD17Q5XLA6 110 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ZNF227Q86WZ6 799 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 PPA2Q9H2U2 334 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 NT5DC2Q9H857 520 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ERVMER34-1Q9H9K5 563 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 SERGEFQ9UGK8 458 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 CBX7O95931 251 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 MRPL19P49406 292 aaKnown RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 ERVK-21P61565 698 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 CLPPQ16740 277 aaPredicted RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 HNRNPA1L2Q32P51 320 aaKnown RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 NIPAL3Q6P499 406 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TCTE3Q8IZS6 198 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 MS4A6EQ96DS6 147 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TMEM168Q9H0V1 697 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ERVK-19Q9WJR5 959 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 CASP8AP2Q9UKL3 1982 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 CACNA1EQ15878 2313 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 GREB1Q4ZG55 1949 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 A0A0B4J2A0 478 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TMEM229AB2RXF0 380 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 KDM4EB2RXH2 506 aaPredicted RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 PRH1P02810 166 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 AKT2P31751 481 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 LTBQ06643 244 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 NOGQ13253 232 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 METTL11BQ5VVY1 283 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 GPAT4Q86UL3 456 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 TOR1AIP2Q8NFQ8 470 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 OR5D18Q8NGL1 313 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 THAP6Q8TBB0 222 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ADAMTS14Q8WXS8 1223 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 SLC25A44Q96H78 314 aaPredicted RBP9.33□□□□□ -0.92
PALB2-201ENST00000261584 SGPP1Q9BX95 441 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 SYT4Q9H2B2 425 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 ACKR4Q9NPB9 350 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 PCDHB16Q9NRJ7 776 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 SHPKQ9UHJ6 478 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
PALB2-201ENST00000261584 A0A087WV48 116 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 MED19A0JLT2 244 aaPredicted RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 POM121BA6NF01 834 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 UBL3O95164 117 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 RAB3DO95716 219 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 CD2P06729 351 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 SRMP19623 302 aa9.32□□□□□ -0.92
PALB2-201ENST00000261584 RBMS1P29558 406 aaKnown RBP9.32□□□□□ -0.92
PALB2-201ENST00000261584 RBM39Q14498 530 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms