RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MPC2O95563 127 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 SBK2P0C263 348 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 ATF1P18846 271 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 SDHBP21912 280 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 OR12D2P58182 307 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 EEF1A1P68104 462 aaKnown RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 CDONQ4KMG0 1287 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 DMKNQ6E0U4 476 aaPredicted RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 PRSS41Q7RTY9 318 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 GKN2Q86XP6 184 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 TEX19Q8NA77 164 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 OR4D9Q8NGE8 314 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 PTP4A1Q93096 173 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 IFT27Q9BW83 186 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 ADGRL4Q9HBW9 690 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 SCP2D1Q9UJQ7 156 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 TP53BP1Q12888 1972 aaPredicted RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 SSNA1O43805 119 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 HYAL3O43820 417 aaPredicted RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 PRG2P13727 222 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 PRKACAP17612 351 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 HTR2AP28223 471 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 NRG3P56975 720 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 RPS15AP62244 130 aaKnown RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 FOXK2Q01167 660 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 DEFB134Q4QY38 66 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 NKAIN2Q5VXU1 208 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 THSD4Q6ZMP0 1018 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 OOSP2Q86WS3 158 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 OR5J2Q8NH18 312 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 TMEM239Q8WW34 195 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 SMAD5Q99717 465 aaKnown RBP15.6■□□□□ 0.09
FOXA1-201ENST00000250448 PCED1AQ9H1Q7 454 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 UBQLN2Q9UHD9 624 aa15.6■□□□□ 0.09
FOXA1-201ENST00000250448 TMEM131Q92545 1883 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 A0A1W2PRG6 482 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 CIB4A0PJX0 185 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ZNF250P15622 560 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 NOS3P29474 1203 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 AFF3P51826 1226 aaKnown RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 KLF9Q13886 244 aaPredicted RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 CMIPQ8IY22 773 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 LSMEM1Q8N8F7 131 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 SRFBP1Q8NEF9 429 aaKnown RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 OR13C2Q8NGS9 318 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 SMAP2Q8WU79 429 aaPredicted RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 PCNPQ8WW12 178 aaKnown RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 DNASE2BQ8WZ79 361 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 LYARQ9NX58 379 aaKnown RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ABRACLQ9P1F3 81 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 UNC13CQ8NB66 2214 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 H0YGG7 62 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 OR7A10O76100 309 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 RCBTB2O95199 551 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 AGR2O95994 175 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ANKRD34CP0C6C1 535 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ARF3P61204 181 aaPredicted RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 HNRNPKP61978 463 aaKnown RBP eCLIP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 FCRLBQ6BAA4 426 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ALKBH2Q6NS38 261 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 RPL13AP3Q6NVV1 102 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ARMC6Q6NXE6 501 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 BAIAP2L2Q6UXY1 529 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 ESPNLQ6ZVH7 1005 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 MS4A15Q8N5U1 240 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 OR56B4Q8NH76 319 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 FAM174AQ8TBP5 190 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 SMPDL3BQ92485 455 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 GHSRQ92847 366 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 SLC38A3Q99624 504 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 SARGQ9BW04 601 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 DUSP15Q9H1R2 295 aaPredicted RBP15.59■□□□□ 0.09
FOXA1-201ENST00000250448 PILRAQ9UKJ1 303 aa15.59■□□□□ 0.09
FOXA1-201ENST00000250448 TRAV1-2A0A0B4J238 106 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 SAGP10523 405 aaPredicted RBP15.58■□□□□ 0.09
FOXA1-201ENST00000250448 PYCR1P32322 319 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 VSX2P58304 361 aaPredicted RBP15.58■□□□□ 0.09
FOXA1-201ENST00000250448 ZP1P60852 638 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 AANATQ16613 207 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 ARHGAP11BQ3KRB8 267 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 GARNL3Q5VVW2 1013 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 SLC22A10Q63ZE4 541 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 RNF113BQ8IZP6 322 aaKnown RBP15.58■□□□□ 0.09
FOXA1-201ENST00000250448 AVL9Q8NBF6 648 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 CEP76Q8TAP6 659 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 ZFYVE21Q9BQ24 234 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 SPRTNQ9H040 489 aaPredicted RBP15.58■□□□□ 0.09
FOXA1-201ENST00000250448 BRD7Q9NPI1 651 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 ST6GALNAC2Q9UJ37 374 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 CAMK2AQ9UQM7 478 aa15.58■□□□□ 0.09
FOXA1-201ENST00000250448 RP1P56715 2156 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 ARPC4-TTLL3A0A0A6YYG9 625 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 A0A0J9YY10 115 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 TRABD2BA6NFA1 517 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 PCP4L1A6NKN8 68 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 RIIAD1A6NNX1 92 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 TNFSF14O43557 240 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 GSTZ1O43708 216 aaPredicted RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 PIAS2O75928 621 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 GKN3PP0CG01 181 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms