RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ZNF780BQ9Y6R6 833 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TRBV23OR9-2A0A075B6M9 112 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 A0A1W2PP55 124 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 H3BSH0 61 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 RGS9O75916 674 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SPP1P10451 314 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 IL9P15248 144 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ANXA7P20073 488 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 HTR2AP28223 471 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRKAR1BP31321 381 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ARFIP1P53367 373 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 HCCSP53701 268 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SIM1P81133 766 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TRMT12Q53H54 448 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PLA1AQ53H76 456 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 NIPAL3Q6P499 406 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SSX6Q7RTT6 188 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 RAB42Q8N4Z0 105 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF433Q8N7K0 673 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR52B4Q8NGK2 314 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR5J2Q8NH18 312 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR5W2Q8NH69 310 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TNFAIP8L1Q8WVP5 186 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PFDN5Q99471 154 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 HDAC8Q9BY41 377 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CCDC86Q9H6F5 360 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ASH2LQ9UBL3 628 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 RPS6KB2Q9UBS0 482 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 MIOXQ9UGB7 285 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRSS47A8MTI9 375 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF705EA8MWA4 302 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PEX12O00623 359 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 FARS2O95363 451 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 EML2O95834 649 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 AHCYP23526 432 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 BTCP35070 178 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 HTRA4P83105 476 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 GK2Q14410 553 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CYB5R2Q6BCY4 276 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 MFSD12Q6NUT3 480 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 VN1R4Q7Z5H5 301 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 FGD2Q7Z6J4 655 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 LURAP1LQ8IV03 231 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 RFLNBQ8N5W9 214 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR4E2Q8NGC2 313 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR5M3Q8NGP4 307 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACOT12Q8WYK0 555 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 KISS1RQ969F8 398 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SCMH1Q96GD3 660 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 C10orf90Q96M02 699 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 DNTTIP1Q9H147 329 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CYSLTR2Q9NS75 346 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SIDT1Q9NXL6 827 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 NTMQ9P121 344 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 KIF25Q9UIL4 384 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 KCNE5Q9UJ90 142 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 DAPL1A0PJW8 107 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 YKT6O15498 198 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 CEACAM5P06731 702 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF888P0CJ79 500 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACHEP22303 614 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 MAT2AP31153 395 aaKnown RBP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 RAD52P43351 418 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR12D2P58182 307 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 HTRA3P83110 453 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRAMEF8Q5VWM4 474 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRAMEF7Q5VXH5 474 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 HEPHL1Q6MZM0 1159 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 RGS7BPQ6MZT1 257 aaPredicted RBP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 FIP1L1Q6UN15 594 aaKnown RBP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 MEPCEQ7L2J0 689 aaKnown RBP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 SLITRK4Q8IW52 837 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 SPAG16Q8N0X2 631 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZCCHC10Q8TBK6 192 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 SFT2D1Q8WV19 159 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 GAL3ST1Q99999 423 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ORAI3Q9BRQ5 295 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 REG4Q9BYZ8 158 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 TMEM185BQ9H7F4 350 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 CA10Q9NS85 328 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ASF1BQ9NVP2 202 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 F5P12259 2224 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 TRAV27A0A087WT01 109 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 MEIKINA0A087WXM9 373 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 A0A1B0GW55 424 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF860A6NHJ4 632 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 J3QLW9 94 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 AIPO00170 330 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 BHLHE40O14503 412 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 SLC19A2O60779 497 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 EIF3GO75821 320 aaKnown RBP eCLIP8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 SERPINA3P01011 423 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 WNT1P04628 370 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms