RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 KCND3Q9UK17 655 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ITPKBP27987 946 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 GUCA2AQ02747 115 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 MED27Q6P2C8 311 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 AGTRAPQ6RW13 159 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 OR4C16Q8NGL9 310 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 PMM1Q92871 262 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 MRPL38Q96DV4 380 aaKnown RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 CBY1Q9Y3M2 126 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 NPFFR2Q9Y5X5 522 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 TRAPPC13A5PLN9 417 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 DRGXA6NNA5 263 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 K7ERQ8 282 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 SERPINA5P05154 406 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 CLUP10909 449 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ST6GAL1P15907 406 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 RAB6AP20340 208 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ACRV1P26436 265 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 P2RX1P51575 399 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 PCBP3P57721 371 aaKnown RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 SKP1P63208 163 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 CCSMST1Q4G0I0 132 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 UBE2NLQ5JXB2 153 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ABHD13Q7L211 337 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 LIMS2Q7Z4I7 341 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 LRRC56Q8IYG6 542 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 OR52L1Q8NGH7 329 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 NKX3-1Q99801 234 aaPredicted RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 RHOFQ9HBH0 211 aa13.55□□□□□ -0.24
PTPRA-201ENST00000216877 ZCCHC3Q9NUD5 404 aaKnown RBP13.55□□□□□ -0.24
PTPRA-201ENST00000216877 IFNA2P01563 188 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 FBXO45P0C2W1 286 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 GRPRP30550 384 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 PPP1R1CQ8WVI7 109 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 OSTF1Q92882 214 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 GLOD5A6NK44 160 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 ACOT7O00154 380 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 CYTIPO60759 359 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 OR8U8P0C7N1 319 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 SFTPCP11686 197 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 HTR1FP30939 366 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 RBP2P50120 134 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 TAS2R60P59551 318 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
PTPRA-201ENST00000216877 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 NAXEQ8NCW5 288 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 SELENOIQ9C0D9 397 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 POFUT1Q9H488 388 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 NOX4Q9NPH5 578 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 SCML2Q9UQR0 700 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 A0A0G2JK05 382 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 NEDD8-MDP1E9PL57 170 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 PHOX2AO14813 284 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 BCL2L11O43521 198 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 FBXO24O75426 580 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 UQCRC2P22695 453 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 CD34P28906 385 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 ATP1B3P54709 279 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 RGS8P57771 180 aaPredicted RBP13.54□□□□□ -0.24
PTPRA-201ENST00000216877 SURF2Q15527 256 aaPredicted RBP13.54□□□□□ -0.24
PTPRA-201ENST00000216877 PGGHGQ32M88 737 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 ARL14Q8N4G2 192 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 UBTD2Q8WUN7 234 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 TMEM169Q96HH4 297 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 TGM7Q96PF1 710 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 CSNK1G1Q9HCP0 422 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 NDOR1Q9UHB4 597 aa13.54□□□□□ -0.24
PTPRA-201ENST00000216877 SULT2B1O00204 365 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 ZNF821O75541 412 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 CNMDO75829 334 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 FURINP09958 794 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 PFN3P60673 137 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 LASP1Q14847 261 aaKnown RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 PYY3Q5JQD4 70 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 ADGRF1Q5T601 910 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 TMPRSS12Q86WS5 348 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 DCUN1D4Q92564 292 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 ACBD6Q9BR61 282 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 CEP350Q5VT06 3117 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 TRAV18A0A075B6X5 111 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 ZNF432O94892 652 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 STATHP02808 62 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 MUC1P15941 1255 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 PPM1FP49593 454 aaPredicted RBP13.53□□□□□ -0.24
PTPRA-201ENST00000216877 HSD17B7P56937 341 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 GPNMBQ14956 572 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 LIPJQ5W064 366 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 UNQ6494/PRO21346Q6UXR6 183 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
PTPRA-201ENST00000216877 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms