RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CD14P08571 375 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 CYC1P08574 325 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 P2RX1P51575 399 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 IL11RAQ14626 422 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 TOMM34Q15785 309 aaPredicted RBP27.02■■□□□ 1.92
PABPN1-201ENST00000216727 CEP19Q96LK0 163 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 NMNAT3Q96T66 252 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 SPSB2Q99619 263 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 WDR77Q9BQA1 342 aaPredicted RBP27.02■■□□□ 1.92
PABPN1-201ENST00000216727 KLHL1Q9NR64 748 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 FBXO4Q9UKT5 387 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 SPEGQ15772 3267 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 GABRPO00591 440 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 NTN3O00634 580 aaPredicted RBP27.02■■□□□ 1.92
PABPN1-201ENST00000216727 RNF13O43567 381 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 CXCR1P25024 350 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 IL10RAQ13651 578 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 PON3Q15166 354 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.02■■□□□ 1.923e-8■□□□□ 10.8
PABPN1-201ENST00000216727 PAPD4Q6PIY7 484 aaKnown RBP27.02■■□□□ 1.92
PABPN1-201ENST00000216727 FAM122BQ7Z309 247 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 MISPQ8IVT2 679 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 SYT14Q8NB59 555 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 WDFY2Q96P53 400 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 SLC30A2Q9BRI3 323 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 MESP1Q9BRJ9 268 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 FKRPQ9H9S5 495 aa27.02■■□□□ 1.92
PABPN1-201ENST00000216727 A0A1W2PQL4 384 aaPredicted RBP27.01■■□□□ 1.91
PABPN1-201ENST00000216727 D6RAR5 112 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 IMPA2O14732 288 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 TNFSF8P32971 234 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 DIO1P49895 249 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 SLC26A5P58743 744 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 TAS2R43P59537 309 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 TRA2AQ13595 282 aaKnown RBP eCLIP27.01■■□□□ 1.91
PABPN1-201ENST00000216727 ALG10Q5BKT4 473 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 GALNT6Q8NCL4 622 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 OR8K3Q8NH51 312 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 CNN2Q99439 309 aaKnown RBP27.01■■□□□ 1.91
PABPN1-201ENST00000216727 HDHD5Q9BXW7 423 aa27.01■■□□□ 1.91
PABPN1-201ENST00000216727 SLC35F4A4IF30 521 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 OR6C68A6NDL8 312 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 LOC110117498-PIK3R3F6TDL0 507 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 ADAM10O14672 748 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 SNX4O95219 450 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 CLEC2LP0C7M8 214 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 OR2T7P0C7T2 308 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 GP1BBP13224 206 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 HNRNPA0Q13151 305 aaKnown RBP27■■□□□ 1.91
PABPN1-201ENST00000216727 OR2T27Q8NH04 317 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 TAAR8Q969N4 342 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 RASD2Q96D21 266 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 ZMYND19Q96E35 227 aaPredicted RBP27■■□□□ 1.91
PABPN1-201ENST00000216727 DCLRE1CQ96SD1 692 aaKnown RBP27■■□□□ 1.91
PABPN1-201ENST00000216727 LPAR4Q99677 370 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 PLEKHB1Q9UF11 243 aaPredicted RBP27■■□□□ 1.91
PABPN1-201ENST00000216727 ZMIZ1Q9ULJ6 1067 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 PCDHGB7Q9Y5F8 929 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 SIRT4Q9Y6E7 314 aaPredicted RBP27■■□□□ 1.91
PABPN1-201ENST00000216727 C17orf51A8MQB3 221 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 SCO2O43819 266 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 NUDT14O95848 222 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 TXNDC12O95881 172 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 SYPP08247 313 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 TMEM205Q6UW68 189 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 PLEKHG7Q6ZR37 379 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 NDEL1Q9GZM8 345 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 PCDHGB6Q9Y5F9 930 aa27■■□□□ 1.91
PABPN1-201ENST00000216727 MEN1O00255 615 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 KHNYNO15037 678 aaKnown RBP26.99■■□□□ 1.91
PABPN1-201ENST00000216727 SPI1P17947 270 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 TGM1P22735 817 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 VASH1Q7L8A9 365 aaPredicted RBP26.99■■□□□ 1.91
PABPN1-201ENST00000216727 CPEB2Q7Z5Q1 589 aaKnown RBP26.99■■□□□ 1.91
PABPN1-201ENST00000216727 LYSMD2Q8IV50 215 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 GPR119Q8TDV5 335 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 ZDBF2Q9HCK1 2354 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 TEX13CA0A0J9YWL9 993 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 PLPP2O43688 288 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 TFP02787 698 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 SDHAP31040 664 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 MRPL14Q6P1L8 145 aaKnown RBP26.99■■□□□ 1.91
PABPN1-201ENST00000216727 TMEM91Q6ZNR0 172 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 NANOGNBQ7Z5D8 188 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 MARCH9Q86YJ5 346 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 PPP1R14BQ96C90 147 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 C4orf36Q96KX1 117 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 Q96M85 177 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 ABCB10Q9NRK6 738 aa26.99■■□□□ 1.91
PABPN1-201ENST00000216727 TRAV36DV7A0A075B6V5 113 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 RGS5O15539 181 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 TBX1O43435 398 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 GMFGO60234 142 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 CPNE3O75131 537 aaKnown RBP26.98■■□□□ 1.91
PABPN1-201ENST00000216727 TGM4P49221 684 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 POLR2HP52434 150 aaKnown RBP26.98■■□□□ 1.91
PABPN1-201ENST00000216727 CTXN1P60606 82 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 EMC4Q5J8M3 183 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 LCN10Q6JVE6 187 aa26.98■■□□□ 1.91
PABPN1-201ENST00000216727 AP3S1Q92572 193 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms