RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF696Q9H7X3 374 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 SIX4Q9UIU6 781 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 RIMS3Q9UJD0 308 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 PRAMEF4O60810 478 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 EPHA5P54756 1037 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 RBPJQ06330 500 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 UNC5DQ6UXZ4 953 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 CLECL1Q8IZS7 167 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 PEAK1Q9H792 1746 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 NCBP2LA6PVI3 153 aaKnown RBP13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF813Q6ZN06 617 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 SIMC1Q8NDZ2 872 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 YLPM1P49750 1951 aaKnown RBP13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 LGALS8O00214 317 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 HBQ1P09105 142 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 TRAPPC2P0DI81 140 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 TRAPPC2BP0DI82 140 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 CASP3P42574 277 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 LSAMPQ13449 338 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 PCK2Q16822 640 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF322Q6U7Q0 402 aaPredicted RBP13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 OR10Z1Q8NGY1 313 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 ADAMTS18Q8TE60 1221 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 C12orf10Q9HB07 376 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 NTN4Q9HB63 628 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 UGT2A1Q9Y4X1 527 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 OR6C68A6NDL8 312 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 C17orf105B2RV13 164 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 YIF1AO95070 293 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 GLB1P16278 677 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 TUSC1Q2TAM9 212 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 RAB3CQ96E17 227 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 SELENOIQ9C0D9 397 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF337Q9Y3M9 751 aa13.69□□□□□ -0.22
SPTLC2-201ENST00000216484 TRAV27A0A087WT01 109 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 KLF11O14901 512 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 GDF1P27539 372 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 GPR18Q14330 331 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ACTBL2Q562R1 376 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 FCRLAQ7L513 359 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 HAVCR2Q8TDQ0 301 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 TAF9BQ9HBM6 251 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 PPRC1Q5VV67 1664 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 RNGTTO60942 597 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 SORBS2O94875 1100 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ELK1P19419 428 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ENPP1P22413 925 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 RELAQ04206 551 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 MLF2Q15773 248 aaPredicted RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 DEFB110Q30KQ9 67 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC41A2Q96JW4 573 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 OR2M2Q96R28 347 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 IL3RAP26951 378 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ACSM1Q08AH1 577 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 PDE7AQ13946 482 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 PCNPQ8WW12 178 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 HEYLQ9NQ87 328 aaPredicted RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 FCGR2AP12318 317 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 HTR5AP47898 357 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 BLOC1S3Q6QNY0 202 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ENDOVQ8N8Q3 282 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 IL17FQ96PD4 163 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 FBXO8Q9NRD0 319 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ZNF586Q9NXT0 402 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 PRELID3BQ9Y3B1 194 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 FUT1P19526 365 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 IER5LQ5T953 404 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 ADIPOR1Q96A54 375 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 IGHG1P01857 330 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 TIFABQ6ZNK6 161 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 NETO1Q8TDF5 533 aa13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 HEMK1Q9Y5R4 338 aaPredicted RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 SETD1AO15047 1707 aaKnown RBP13.68□□□□□ -0.22
SPTLC2-201ENST00000216484 SULT1A3P0DMM9 295 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SULT1A4P0DMN0 295 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SPP1P10451 314 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC25A11Q02978 314 aaKnown RBP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 PHLDA2Q53GA4 152 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SLC5A8Q8N695 610 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 OR4K5Q8NGD3 323 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 ST8SIA2Q92186 375 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 SMOQ99835 787 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 NUDT22Q9BRQ3 303 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 MTHFD2P13995 350 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 HTR3AP46098 478 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 OR13C5Q8NGS8 318 aa13.67□□□□□ -0.22
SPTLC2-201ENST00000216484 OR13C2Q8NGS9 318 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms