RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RNPS1Q15287 305 aaKnown RBP18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 PAQR6Q6TCH4 344 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 MBOAT2Q6ZWT7 520 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 FCRLAQ7L513 359 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 FJX1Q86VR8 437 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 LINC00471Q8N535 108 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 STMN2Q93045 179 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 TAAR8Q969N4 342 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 TTYH2Q9BSA4 534 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 PTDSS2Q9BVG9 487 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 DENND2DQ9H6A0 471 aaPredicted RBP18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 ARMC1Q9NVT9 282 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 TMEM5Q9Y2B1 443 aa18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 SAMHD1Q9Y3Z3 626 aaKnown RBP18.08■□□□□ 0.48
RHBDD3-201ENST00000216085 MBD3L4A6NDZ8 208 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 MBD3L3A6NE82 208 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 MBD3L5A6NJ08 208 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 HNRNPRO43390 633 aaKnown RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 DEAF1O75398 565 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 PLGP00747 810 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 TIMP3P35625 211 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 UGT2B15P54855 530 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 RTL6Q6ICC9 239 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 MAMDC2Q7Z304 686 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 MBD3L2Q8NHZ7 208 aaPredicted RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 PIGXQ8TBF5 258 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 SLC7A13Q8TCU3 470 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 SGTBQ96EQ0 304 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 ALPK1Q96QP1 1244 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 FKRPQ9H9S5 495 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 NANSQ9NR45 359 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 ENO4A6NNW6 628 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 LRRTM2O43300 516 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 HIST1H2ABP04908 130 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 AGFG1P52594 562 aaKnown RBP18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 PODNL1Q6PEZ8 512 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 HIST3H2AQ7L7L0 130 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 NRMQ8IXM6 262 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 HIST1H2ACQ93077 130 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 SLCO4A1Q96BD0 722 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 GLRX2Q9NS18 164 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 KLHL9Q9P2J3 617 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 DNAJB9Q9UBS3 223 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 SLC5A6Q9Y289 635 aa18.07■□□□□ 0.48
RHBDD3-201ENST00000216085 A0A087WUU8 490 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 E2F6O75461 281 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 CH25HO95992 272 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 GLI4P10075 376 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 IFI30P13284 250 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 FASP25445 335 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 ARHGDIAP52565 204 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 PMPCAQ10713 525 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 ZNF74Q16587 644 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 OTUD3Q5T2D3 398 aaPredicted RBP18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 RIPPLY2Q5TAB7 128 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 SCAIQ8N9R8 606 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 PFN4Q8NHR9 129 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 RNF128Q8TEB7 428 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 RND1Q92730 232 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 BPIFA2Q96DR5 249 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 TACO1Q9BSH4 297 aaKnown RBP18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 MEPEQ9NQ76 525 aaPredicted RBP18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 ZNF229Q9UJW7 825 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 B3GALT5Q9Y2C3 310 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 LYVE1Q9Y5Y7 322 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 MPDZO75970 2070 aa18.06■□□□□ 0.48
RHBDD3-201ENST00000216085 TRBV4-1A0A0J9YWV2 114 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 FTCDNL1E5RQL4 147 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 SMAD9O15198 467 aaKnown RBP18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 OR10H3O60404 316 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 VAMP5O95183 116 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 TGM6O95932 706 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 GRPRP30550 384 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 HMGA2P52926 109 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 CTBP2P56545 445 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 TAF11Q15544 211 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 OR4K5Q8NGD3 323 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 ROBO4Q8WZ75 1007 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 DMRTA2Q96SC8 542 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 RNF122Q9H9V4 155 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 EMC3Q9P0I2 261 aa18.05■□□□□ 0.48
RHBDD3-201ENST00000216085 IGHV3-15A0A0B4J1V0 119 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 SH3PXD2BA1X283 911 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 AQP7P3A6NL99 342 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 HSPB2A8KAH6 182 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 CLOCKO15516 846 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 TIPRLO75663 272 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 AKR7A3O95154 331 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 OR6A2O95222 327 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 LDLRP01130 860 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 BGLAPP02818 100 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 SAGP10523 405 aaPredicted RBP18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 PRKCDQ05655 676 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 HSPB2Q16082 182 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 EXOC3L2Q2M3D2 409 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 EEF1A1P5Q5VTE0 462 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 TMEM225Q6GV28 225 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 ADPRHL1Q8NDY3 354 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 PYDC1Q8WXC3 89 aa18.04■□□□□ 0.48
RHBDD3-201ENST00000216085 BDH2Q9BUT1 245 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms