RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SIRPAP78324 504 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 LINC00696Q6ZRV3 163 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR13C9Q8NGT0 318 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 GHSRQ92847 366 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 CHRDQ9H2X0 955 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 CPNE5Q9HCH3 593 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 EMC3Q9P0I2 261 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 TNFRSF10AO00220 468 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 IDUAP35475 653 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 ERVK-16P61578 105 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 RNF4P78317 190 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 VEZF1Q14119 521 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 BCL2A1Q16548 175 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 CHST11Q9NPF2 352 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 H0Y8X5 98 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 CLINT1Q14677 625 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 RAB41Q5JT25 222 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 SLC39A11Q8N1S5 342 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 DNAJC22Q8N4W6 341 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 OR5H6Q8NGV6 325 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 SECTM1Q8WVN6 248 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 TANKQ92844 425 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.385e-29■□□□□ 10.6
TGFBR3-201ENST00000212355 SCN11AQ9UI33 1791 aa12.65□□□□□ -0.38
TGFBR3-201ENST00000212355 PRAMEF26H0Y7S4 382 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 HNF1AP20823 631 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 TAS2R20P59543 309 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 FXNQ16595 210 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 FAAP20Q6NZ36 180 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 POC1BQ8TC44 478 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 ACOT11Q8WXI4 607 aaPredicted RBP12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 PIGTQ969N2 578 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 FOXRED1Q96CU9 486 aaPredicted RBP12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 SEC22CQ9BRL7 303 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC23A2Q9UGH3 650 aa12.65□□□□□ -0.39
TGFBR3-201ENST00000212355 FABP7O15540 132 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 PEX14O75381 377 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 ANXA7P20073 488 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 KCNJ10P78508 379 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 OR5K2Q8NHB8 316 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 ENKD1Q9H0I2 346 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 TCEAL2Q9H3H9 227 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 NOX4Q9NPH5 578 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 EIF4HQ15056 248 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 IDO2Q6ZQW0 420 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 TXNL4BQ9NX01 149 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 EFSO43281 561 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 UGDHO60701 494 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 IFNA4P05014 189 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 PAQR6Q6TCH4 344 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 HTR3DQ70Z44 454 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 RBM12BQ8IXT5 1001 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 TMEM102Q8N9M5 508 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 SELENOIQ9C0D9 397 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 PCSK6P29122 969 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 CUTCQ9NTM9 273 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 A0A0B4J203 849 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC6A19Q695T7 634 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF610Q8N9Z0 462 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
TGFBR3-201ENST00000212355 METTL15A6NJ78 407 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 KCNK5O95279 499 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 PPT1P50897 306 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 PHLDA2Q53GA4 152 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GNG13Q9P2W3 67 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 FER1L6Q2WGJ9 1857 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GDNFP39905 211 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 UBE2MP61081 183 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 Q6ZSR9 355 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 NKX3-1Q99801 234 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 C1GALT1Q9NS00 363 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 NUMBLQ9Y6R0 609 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GON4LQ3T8J9 2241 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 WASH4PA8MWX3 477 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GFRA2O00451 464 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms