RNA–Protein interactions for RNA: ENST00000641721.1

MTHFR-213, Transcript of methylenetetrahydrofolate reductase, human

Gene MTHFR, Length 891 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTHFR-213	ENST00000641721	MYD88	Q99836	296 aa		13.77	□□□□□ -0.21
MTHFR-213	ENST00000641721	SALL2	Q9Y467	1007 aa	Predicted RBP	13.77	□□□□□ -0.21
MTHFR-213	ENST00000641721	GRIPAP1	Q4V328	841 aa		13.76	□□□□□ -0.21
MTHFR-213	ENST00000641721	DPP8	Q6V1X1	898 aa	Predicted RBP	13.76	□□□□□ -0.21
MTHFR-213	ENST00000641721	LDHD	Q86WU2	507 aa		13.76	□□□□□ -0.21
MTHFR-213	ENST00000641721	CLEC11A	Q9Y240	323 aa		13.76	□□□□□ -0.21
MTHFR-213	ENST00000641721	PSME4	Q14997	1843 aa		13.76	□□□□□ -0.21
MTHFR-213	ENST00000641721	WWC1	Q8IX03	1113 aa		13.75	□□□□□ -0.21
MTHFR-213	ENST00000641721	SP8	Q8IXZ3	490 aa		13.75	□□□□□ -0.21
MTHFR-213	ENST00000641721	MPND	Q8N594	471 aa		13.75	□□□□□ -0.21
MTHFR-213	ENST00000641721	JARID2	Q92833	1246 aa	Predicted RBP	13.75	□□□□□ -0.21
MTHFR-213	ENST00000641721	CELF1	Q92879	486 aa	Known RBP	13.75	□□□□□ -0.21
MTHFR-213	ENST00000641721		A0A1B0GUL6	1792 aa		13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	IRS4	O14654	1257 aa	Predicted RBP	13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	BBOX1	O75936	387 aa		13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	LMOD1	P29536	600 aa	Predicted RBP	13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	CCDC30	Q5VVM6	783 aa		13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	SUPT20H	Q8NEM7	779 aa		13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	SCN9A	Q15858	1988 aa		13.74	□□□□□ -0.21
MTHFR-213	ENST00000641721	PCNT	O95613	3336 aa		13.73	□□□□□ -0.21
MTHFR-213	ENST00000641721	SCNN1D	P51172	638 aa		13.73	□□□□□ -0.21
MTHFR-213	ENST00000641721	CCDC27	Q2M243	656 aa		13.73	□□□□□ -0.21
MTHFR-213	ENST00000641721	TWISTNB	Q3B726	338 aa	Predicted RBP	13.73	□□□□□ -0.21
MTHFR-213	ENST00000641721	MKRN1	Q9UHC7	482 aa	Known RBP	13.73	□□□□□ -0.21
MTHFR-213	ENST00000641721	PASK	Q96RG2	1323 aa		13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	DDX58	O95786	925 aa	Known RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	SF3B3	Q15393	1217 aa	Known RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	MAP1S	Q66K74	1059 aa	Predicted RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	PNMA8A	Q86V59	439 aa	Predicted RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	JMY	Q8N9B5	988 aa		13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	STK31	Q9BXU1	1019 aa		13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	MAP3K2	Q9Y2U5	619 aa		13.72	□□□□□ -0.21
MTHFR-213	ENST00000641721	FANCI	Q9NVI1	1328 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	EPS15	P42566	896 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	TRIM28	Q13263	835 aa	Known RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	G2E3	Q7L622	706 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	GPR101	Q96P66	508 aa	Predicted RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	METTL22	Q9BUU2	404 aa	Predicted RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	SEC31B	Q9NQW1	1179 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	CREBZF	Q9NS37	354 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	CWC25	Q9NXE8	425 aa	Predicted RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	ZNRF3	Q9ULT6	936 aa		13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.71	□□□□□ -0.21
MTHFR-213	ENST00000641721	ZNF646	O15015	1829 aa	Predicted RBP	13.71	□□□□□ -0.22
MTHFR-213	ENST00000641721	PI4KAP2	A4QPH2	592 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	RIMBP2	O15034	1052 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	ITGBL1	O95965	494 aa	Predicted RBP	13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	GPSM2	P81274	684 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	CXCL9	Q07325	125 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	KIAA2012	Q0VF49	1180 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	TMC4	Q7Z404	712 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	FAM9B	Q8IZU0	186 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	PI4KAP1	Q8N8J0	262 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	CCDC191	Q8NCU4	936 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	VPS33B	Q9H267	617 aa		13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	POLR2A	P24928	1970 aa	Known RBP	13.7	□□□□□ -0.22
MTHFR-213	ENST00000641721	IL16	Q14005	1332 aa		13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	C6orf229	H3BNL8	230 aa		13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	RAD17	O75943	681 aa		13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	PCCA	P05165	728 aa	Predicted RBP	13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	GMPS	P49915	693 aa	Predicted RBP	13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	CNTROB	Q8N137	903 aa		13.69	□□□□□ -0.22
MTHFR-213	ENST00000641721	YDJC	A8MPS7	323 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	PDE8A	O60658	829 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	SLC4A2	P04920	1241 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	IGKV5-2	P06315	115 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	FMR1	Q06787	632 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	9e-8	■□□□□ 11.3
MTHFR-213	ENST00000641721	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	CIAPIN1	Q6FI81	312 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	KSR2	Q6VAB6	950 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	BCL2L13	Q9BXK5	485 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	CHMP4A	Q9BY43	222 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	DBNDD1	Q9H9R9	158 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	GPRC5D	Q9NZD1	345 aa		13.68	□□□□□ -0.22
MTHFR-213	ENST00000641721	TMEM88B	A6NKF7	163 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	HSPA1A	P0DMV8	641 aa	Known RBP	13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	HSPA1B	P0DMV9	641 aa	Known RBP	13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	RPS8	P62241	208 aa	Known RBP	13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	NEXN	Q0ZGT2	675 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	WASHC4	Q2M389	1173 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	CCDC152	Q4G0S7	254 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	POLL	Q9UGP5	575 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	CNTNAP1	P78357	1384 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	THSD7B	Q9C0I4	1608 aa		13.67	□□□□□ -0.22
MTHFR-213	ENST00000641721	CDHR2	Q9BYE9	1310 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	SHTN1	A0MZ66	631 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	EXOSC9	Q06265	439 aa	Known RBP	13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	FLII	Q13045	1269 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	DOK7	Q18PE1	504 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	IFFO2	Q5TF58	517 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	USP50	Q70EL3	339 aa	Predicted RBP	13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	TBC1D16	Q8TBP0	767 aa		13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	ADARB2	Q9NS39	739 aa	Known RBP	13.66	□□□□□ -0.22
MTHFR-213	ENST00000641721	NEURL1B	A8MQ27	555 aa		13.65	□□□□□ -0.22
MTHFR-213	ENST00000641721	TRAF5	O00463	557 aa		13.65	□□□□□ -0.22
MTHFR-213	ENST00000641721	ECE2	O60344	883 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms