RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 CEP112Q8N8E3 955 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 PIBF1Q8WXW3 757 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 CTAGE9A4FU28 777 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 BRD1O95696 1058 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 CCDC172P0C7W6 258 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 TDO2P48775 406 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 ZFYVE27Q5T4F4 411 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 CTR9Q6PD62 1173 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 PPP1R12BO60237 982 aaPredicted RBP3.51□□□□□ -1.85
LPP-222ENST00000640853 GADD45BO75293 160 aaPredicted RBP3.51□□□□□ -1.85
LPP-222ENST00000640853 CETN1Q12798 172 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 EPRSP07814 1512 aaKnown RBP3.51□□□□□ -1.85
LPP-222ENST00000640853 HMGXB3Q12766 1538 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 GTF2F1P35269 517 aaKnown RBP eCLIP3.51□□□□□ -1.853e-6■■■■□ 22.4
LPP-222ENST00000640853 GTF2A1P52655 376 aaPredicted RBP3.51□□□□□ -1.85
LPP-222ENST00000640853 ARFGAP3Q9NP61 516 aa3.51□□□□□ -1.85
LPP-222ENST00000640853 ACEP12821 1306 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 NCOA7Q8NI08 942 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 PTCD1O75127 700 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 IFI16Q16666 785 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 ALS2CR12Q96Q35 445 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 GRIN2AQ12879 1464 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CTAGE15A4D2H0 777 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CTAGE8P0CG41 777 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CTAGE6Q86UF2 777 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CTAGE4Q8IX94 777 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 KRT23Q9C075 422 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CCDC8Q9H0W5 538 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 GIMAP7Q8NHV1 300 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TMEM63CQ9P1W3 806 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 NSD3Q9BZ95 1437 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 RIOK3O14730 519 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 SYKP43405 635 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CKAP4Q07065 602 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 NUP88Q99567 741 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 MKNK2Q9HBH9 465 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TRAPPC8Q9Y2L5 1435 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 KCNA6P17658 529 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 MFSD6Q6ZSS7 791 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 HOOK3Q86VS8 718 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TEX13AQ9BXU3 409 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 SHTN1A0MZ66 631 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CD2BP2O95400 341 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 FLIIQ13045 1269 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 KSR2Q6VAB6 950 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 GOLGA1Q92805 767 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 JARID2Q92833 1246 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 ZHX3Q9H4I2 956 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 DDX17Q92841 729 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 MEIS3Q99687 375 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TCP11L1Q9NUJ3 509 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 GJB2P29033 226 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 LMAN1P49257 510 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 IFFO1Q0D2I5 559 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 SLF2Q8IX21 1173 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 ANKRD24Q8TF21 1146 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 RAB34Q9BZG1 259 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 MAGI1Q96QZ7 1491 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 POLR3DP05423 398 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 NBPF7P0C2Y1 421 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 CCT2P78371 535 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 SPTY2D1Q68D10 685 aaPredicted RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 KLHL10Q6JEL2 608 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CEP85Q6P2H3 762 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 MPRIPQ6WCQ1 1025 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 FAM114A1Q8IWE2 563 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 NGLY1Q96IV0 654 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 UTP14CQ5TAP6 766 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 TAX1BP1Q86VP1 789 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TSGA10Q9BZW7 698 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 TAOK3Q9H2K8 898 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 DACT1Q9NYF0 836 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 GOLGA6L10A0A0M3HER8 536 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 N4BP3O15049 544 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CLEC17AQ6ZS10 378 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 RBM28Q9NW13 759 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 MAP3K2Q9Y2U5 619 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 SGSM3Q96HU1 749 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CHL1O00533 1208 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 SNW1Q13573 536 aaKnown RBP3.5□□□□□ -1.85
LPP-222ENST00000640853 DYDC1Q8WWB3 177 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 CHAMP1Q96JM3 812 aa3.5□□□□□ -1.85
LPP-222ENST00000640853 GNAQP50148 359 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 POLKQ9UBT6 870 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 TMEM67Q5HYA8 995 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 CPLX3Q8WVH0 158 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 ORAI2Q96SN7 254 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 SP100P23497 879 aaPredicted RBP3.49□□□□□ -1.85
LPP-222ENST00000640853 ERBB4Q15303 1308 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 RBM26Q5T8P6 1007 aaKnown RBP3.49□□□□□ -1.85
LPP-222ENST00000640853 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 PI4KAP1Q8N8J0 262 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 RHPN1Q8TCX5 695 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 CCDC85AQ96PX6 553 aaPredicted RBP3.49□□□□□ -1.85
LPP-222ENST00000640853 MYD88Q99836 296 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 TOP2BQ02880 1626 aa3.49□□□□□ -1.85
LPP-222ENST00000640853 GPBP1L1Q9HC44 474 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms