RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	SIK1	P57059	783 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	GORAB	Q5T7V8	394 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	USP48	Q86UV5	1035 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	PI4KAP1	Q8N8J0	262 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	MNS1	Q8NEH6	495 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352	IGSF1	Q8N6C5	1336 aa		10.32	□□□□□ -0.76
CNTN2-231	ENST00000640352		G3V3G9	751 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	SNRPA1	P09661	255 aa	Known RBP	10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	PDC	P20941	246 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	PSMA5	P28066	241 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	DCAF8	Q5TAQ9	597 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	CNPY2	Q9Y2B0	182 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	HMGB1	P09429	215 aa	Known RBP	10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	TERF1	P54274	439 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	EZH2	Q15910	746 aa	Known RBP	10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	AATK	Q6ZMQ8	1374 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	MAP3K5	Q99683	1374 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	CYP2E1	P05181	493 aa	Predicted RBP	10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	CCDC183	Q5T5S1	534 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	IL25	Q9H293	177 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	SPATA31A5	Q5VU36	1347 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	SPATA31A7	Q8IWB4	1347 aa		10.31	□□□□□ -0.76
CNTN2-231	ENST00000640352	LTBP4	Q8N2S1	1624 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	ZNF853	P0CG23	659 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	FOSB	P53539	338 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	HSP90AB3P	Q58FF7	597 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	RTCB	Q9Y3I0	505 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	CYP46A1	Q9Y6A2	500 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	SSR1	P43307	286 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	TDO2	P48775	406 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	NOM1	Q5C9Z4	860 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	GIMAP6	Q6P9H5	292 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	CWC27	Q6UX04	472 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	FILIP1	Q7Z7B0	1213 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	TNMD	Q9H2S6	317 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	CAMK4	Q16566	473 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	TIGD1	Q96MW7	591 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	SRP68	Q9UHB9	627 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	ZBTB1	Q9Y2K1	713 aa		10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	LRRFIP2	Q9Y608	721 aa	Known RBP	10.3	□□□□□ -0.76
CNTN2-231	ENST00000640352	RTL1	A6NKG5	1358 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	NRXN3	Q9Y4C0	1643 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	GOLIM4	O00461	696 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	PROSER3	Q2NL68	480 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	CWF19L2	Q2TBE0	894 aa	Known RBP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	NBPF14	Q5TI25	921 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	CHMP4C	Q96CF2	233 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	ESYT1	Q9BSJ8	1104 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	FSD1	Q9BTV5	496 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	FERMT3	Q86UX7	667 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	TRMT112	Q9UI30	125 aa	Known RBP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	DLC1	Q96QB1	1528 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	DZIP3	Q86Y13	1208 aa	Known RBP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	STK32B	Q9NY57	414 aa		10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.29	□□□□□ -0.76
CNTN2-231	ENST00000640352	CD163L1	Q9NR16	1453 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	FAM173B	Q6P4H8	233 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	KIF1BP	Q96EK5	621 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	GTPBP4	Q9BZE4	634 aa	Known RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	CDC42BPG	Q6DT37	1551 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	DCC	P43146	1447 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	SSH2	Q76I76	1423 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	HIP1	O00291	1037 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	ARID4A	P29374	1257 aa	Predicted RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	KRT85	P78386	507 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	FLII	Q13045	1269 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	LARP1B	Q659C4	914 aa	Known RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	CCDC73	Q6ZRK6	1079 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	ERC1	Q8IUD2	1116 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	TCEANC2	Q96MN5	208 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	TSPYL1	Q9H0U9	437 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	TMX4	Q9H1E5	349 aa	Predicted RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	NUP62CL	Q9H1M0	184 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	MAP3K2	Q9Y2U5	619 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	COL3A1	P02461	1466 aa	Predicted RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	MYCN	P04198	464 aa	Predicted RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	CEBPZ	Q03701	1054 aa	Known RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	TTLL7	Q6ZT98	887 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	JAKMIP1	Q96N16	626 aa	Known RBP	10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	TMX1	Q9H3N1	280 aa		10.28	□□□□□ -0.76
CNTN2-231	ENST00000640352	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	10.27	□□□□□ -0.76
CNTN2-231	ENST00000640352	UBE3B	Q7Z3V4	1068 aa		10.27	□□□□□ -0.76
CNTN2-231	ENST00000640352	KIF20A	O95235	890 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	TXNRD1	Q16881	649 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	TRAPPC3L	Q5T215	181 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	PDLIM2	Q96JY6	352 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	CHD2	O14647	1828 aa	Known RBP	10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	CRB1	P82279	1406 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	ADGRB2	O60241	1585 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	RAB11FIP3	O75154	756 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	CHML	P26374	656 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	MAP3K11	Q16584	847 aa		10.27	□□□□□ -0.77
CNTN2-231	ENST00000640352	CCDC83	Q8IWF9	413 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms