RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
VPS51-217ENST00000639871 PHAXQ9H814 394 aaKnown RBP22.76■■□□□ 1.23
VPS51-217ENST00000639871 ZNRF3Q9ULT6 936 aa22.76■■□□□ 1.23
VPS51-217ENST00000639871 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
VPS51-217ENST00000639871 EPS15P42566 896 aa22.75■■□□□ 1.23
VPS51-217ENST00000639871 CXCL9Q07325 125 aa22.75■■□□□ 1.23
VPS51-217ENST00000639871 CNTROBQ8N137 903 aa22.75■■□□□ 1.23
VPS51-217ENST00000639871 ZNF428Q96B54 188 aa22.75■■□□□ 1.23
VPS51-217ENST00000639871 CNTNAP1P78357 1384 aa22.75■■□□□ 1.23
VPS51-217ENST00000639871 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
VPS51-217ENST00000639871 TMEM88BA6NKF7 163 aa22.74■■□□□ 1.23
VPS51-217ENST00000639871 MAP1SQ66K74 1059 aaPredicted RBP22.74■■□□□ 1.23
VPS51-217ENST00000639871 CLEC11AQ9Y240 323 aa22.74■■□□□ 1.23
VPS51-217ENST00000639871 DUOX1Q9NRD9 1551 aa22.74■■□□□ 1.23
VPS51-217ENST00000639871 LMOD1P29536 600 aaPredicted RBP22.73■■□□□ 1.23
VPS51-217ENST00000639871 GOLGA2Q08379 1002 aa22.73■■□□□ 1.23
VPS51-217ENST00000639871 NCBP3Q53F19 620 aaKnown RBP22.73■■□□□ 1.23
VPS51-217ENST00000639871 RIC3Q7Z5B4 369 aa22.73■■□□□ 1.23
VPS51-217ENST00000639871 ZBTB38Q8NAP3 1195 aaPredicted RBP22.73■■□□□ 1.23
VPS51-217ENST00000639871 CELF1Q92879 486 aaKnown RBP22.73■■□□□ 1.23
VPS51-217ENST00000639871 LRRC37AA6NMS7 1700 aa22.73■■□□□ 1.23
VPS51-217ENST00000639871 IRS4O14654 1257 aaPredicted RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 HSPA1AP0DMV8 641 aaKnown RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 HSPA1BP0DMV9 641 aaKnown RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 COL13A1Q5TAT6 717 aaPredicted RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 USP50Q70EL3 339 aaPredicted RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 TSPYL6Q8N831 410 aa22.72■■□□□ 1.23
VPS51-217ENST00000639871 CHMP4AQ9BY43 222 aa22.72■■□□□ 1.23
VPS51-217ENST00000639871 GPRC5DQ9NZD1 345 aa22.72■■□□□ 1.23
VPS51-217ENST00000639871 MKRN1Q9UHC7 482 aaKnown RBP22.72■■□□□ 1.23
VPS51-217ENST00000639871 COL4A1P02462 1669 aa22.71■■□□□ 1.23
VPS51-217ENST00000639871 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
VPS51-217ENST00000639871 WWC1Q8IX03 1113 aa22.7■■□□□ 1.22
VPS51-217ENST00000639871 CCDC191Q8NCU4 936 aa22.7■■□□□ 1.22
VPS51-217ENST00000639871 CDHR2Q9BYE9 1310 aa22.69■■□□□ 1.22
VPS51-217ENST00000639871 METTL22Q9BUU2 404 aaPredicted RBP22.69■■□□□ 1.22
VPS51-217ENST00000639871 RASSF10A6NK89 507 aa22.68■■□□□ 1.22
VPS51-217ENST00000639871 YDJCA8MPS7 323 aa22.68■■□□□ 1.22
VPS51-217ENST00000639871 PCCAP05165 728 aaPredicted RBP22.68■■□□□ 1.22
VPS51-217ENST00000639871 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
VPS51-217ENST00000639871 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
VPS51-217ENST00000639871 CIAPIN1Q6FI81 312 aa22.68■■□□□ 1.22
VPS51-217ENST00000639871 MYD88Q99836 296 aa22.68■■□□□ 1.22
VPS51-217ENST00000639871 ADARB2Q9NS39 739 aaKnown RBP22.68■■□□□ 1.22
VPS51-217ENST00000639871 TAF1P21675 1872 aa22.67■■□□□ 1.22
VPS51-217ENST00000639871 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
VPS51-217ENST00000639871 GMPSP49915 693 aaPredicted RBP22.67■■□□□ 1.22
VPS51-217ENST00000639871 RPS8P62241 208 aaKnown RBP22.67■■□□□ 1.22
VPS51-217ENST00000639871 TSR2Q969E8 191 aaKnown RBP22.67■■□□□ 1.22
VPS51-217ENST00000639871 PGAP2Q9UHJ9 254 aa22.67■■□□□ 1.22
VPS51-217ENST00000639871 IL16Q14005 1332 aa22.66■■□□□ 1.22
VPS51-217ENST00000639871 VEGFBP49765 207 aa22.66■■□□□ 1.22
VPS51-217ENST00000639871 TNIP1Q15025 636 aa22.66■■□□□ 1.22
VPS51-217ENST00000639871 POLLQ9UGP5 575 aa22.66■■□□□ 1.22
VPS51-217ENST00000639871 NSFL1CQ9UNZ2 370 aaKnown RBP22.66■■□□□ 1.22
VPS51-217ENST00000639871 RAD17O75943 681 aa22.65■■□□□ 1.22
VPS51-217ENST00000639871 DDX58O95786 925 aaKnown RBP22.65■■□□□ 1.22
VPS51-217ENST00000639871 GPSM2P81274 684 aa22.65■■□□□ 1.22
VPS51-217ENST00000639871 WASHC4Q2M389 1173 aa22.65■■□□□ 1.22
VPS51-217ENST00000639871 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
VPS51-217ENST00000639871 PODXL2Q9NZ53 605 aa22.65■■□□□ 1.22
VPS51-217ENST00000639871 KSR2Q6VAB6 950 aa22.64■■□□□ 1.21
VPS51-217ENST00000639871 MAP3K2Q9Y2U5 619 aa22.64■■□□□ 1.21
VPS51-217ENST00000639871 PDE8AO60658 829 aa22.63■■□□□ 1.21
VPS51-217ENST00000639871 IGKV5-2P06315 115 aa22.63■■□□□ 1.21
VPS51-217ENST00000639871 TBC1D16Q8TBP0 767 aa22.63■■□□□ 1.21
VPS51-217ENST00000639871 SEC31BQ9NQW1 1179 aa22.63■■□□□ 1.21
VPS51-217ENST00000639871 PI4KAP2A4QPH2 592 aa22.62■■□□□ 1.21
VPS51-217ENST00000639871 HIRAP54198 1017 aaPredicted RBP22.62■■□□□ 1.21
VPS51-217ENST00000639871 FMR1Q06787 632 aaKnown RBP eCLIP22.62■■□□□ 1.21
VPS51-217ENST00000639871 CST9Q5W186 159 aa22.62■■□□□ 1.21
VPS51-217ENST00000639871 PI4KAP1Q8N8J0 262 aa22.62■■□□□ 1.21
VPS51-217ENST00000639871 ZC3H15Q8WU90 426 aaKnown RBP22.62■■□□□ 1.21
VPS51-217ENST00000639871 DEFB115Q30KQ5 88 aa22.61■■□□□ 1.21
VPS51-217ENST00000639871 TWISTNBQ3B726 338 aaPredicted RBP22.61■■□□□ 1.21
VPS51-217ENST00000639871 CCDC152Q4G0S7 254 aa22.61■■□□□ 1.21
VPS51-217ENST00000639871 DPF2Q92785 391 aa22.61■■□□□ 1.21
VPS51-217ENST00000639871 MRS2Q9HD23 443 aa22.61■■□□□ 1.21
VPS51-217ENST00000639871 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
VPS51-217ENST00000639871 TRAF5O00463 557 aa22.6■■□□□ 1.21
VPS51-217ENST00000639871 C6orf229H3BNL8 230 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 JARID2Q92833 1246 aaPredicted RBP22.59■■□□□ 1.21
VPS51-217ENST00000639871 EYA3Q99504 573 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 STK31Q9BXU1 1019 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 DBNDD1Q9H9R9 158 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 WBP1LQ9NX94 342 aa22.59■■□□□ 1.21
VPS51-217ENST00000639871 CNOT7Q9UIV1 285 aaKnown RBP22.59■■□□□ 1.21
VPS51-217ENST00000639871 SHTN1A0MZ66 631 aa22.58■■□□□ 1.21
VPS51-217ENST00000639871 PSMD14O00487 310 aa22.58■■□□□ 1.21
VPS51-217ENST00000639871 G2E3Q7L622 706 aa22.58■■□□□ 1.21
VPS51-217ENST00000639871 TRPM4Q8TD43 1214 aa22.58■■□□□ 1.21
VPS51-217ENST00000639871 RTL9Q8NET4 1388 aa22.58■■□□□ 1.21
VPS51-217ENST00000639871 RIMBP2O15034 1052 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 FOXN1O15353 648 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 ANP32CO43423 234 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 SLC4A2P04920 1241 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 KCNQ5Q9NR82 932 aa22.57■■□□□ 1.2
VPS51-217ENST00000639871 ABT1Q9ULW3 272 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms