RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 KIAA0753Q2KHM9 967 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 PPP4R4Q6NUP7 873 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 SPATA7Q9P0W8 599 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 GBP2P32456 591 aaPredicted RBP4.96□□□□□ -1.62
SCN3A-209ENST00000639244 TUBA1BP68363 451 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 KBTBD12Q3ZCT8 623 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 COBLL1Q53SF7 1204 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 TUBA1AQ71U36 451 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 ARL6IP6Q8N6S5 226 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 DESP17661 470 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 NEK2P51955 445 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 DKK3Q9UBP4 350 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 ATP6V0A2Q9Y487 856 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 PRC1O43663 620 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 FCHSD2O94868 740 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 YY1P25490 414 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 NUCB1Q02818 461 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 TAF11Q15544 211 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 ATP2B3Q16720 1220 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 SLC5A9Q2M3M2 681 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 AKNAD1Q5T1N1 836 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 RNF187Q5TA31 235 aaPredicted RBP4.96□□□□□ -1.62
SCN3A-209ENST00000639244 BTN2A1Q7KYR7 527 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 KIF18AQ8NI77 898 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 GPATCH3Q96I76 525 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 NAALADL2Q58DX5 795 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 TMEM110Q86TL2 294 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 ERC1Q8IUD2 1116 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.96□□□□□ -1.62
SCN3A-209ENST00000639244 KIAA1522Q9P206 1035 aaPredicted RBP4.96□□□□□ -1.62
SCN3A-209ENST00000639244 EVC2Q86UK5 1308 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 GCFC2P16383 781 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 LRRC49Q8IUZ0 686 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 KIAA0825Q8IV33 1275 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 NUP133Q8WUM0 1156 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 RTF1Q92541 710 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 CD248Q9HCU0 757 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 CHMP5Q9NZZ3 219 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 RRP15Q9Y3B9 282 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 KIF2AO00139 706 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 FLCNQ8NFG4 579 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 KRT82Q9NSB4 513 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 IP6K2Q9UHH9 426 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 LUC7L2Q9Y383 392 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 ZNF24P17028 368 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 WTAPQ15007 396 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 RELL1Q8IUW5 271 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 HELQQ8TDG4 1101 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 KCNB2Q92953 911 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 KIF5BP33176 963 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 SUN5Q8TC36 379 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 PRELID1Q9Y255 219 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 TLDC2A0PJX2 215 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 LRRC23Q53EV4 343 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 PRPF38AQ8NAV1 312 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 PIBF1Q8WXW3 757 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 C8orf37Q96NL8 207 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 FMNL1O95466 1100 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 VIMP08670 466 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 IQCA1Q86XH1 822 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 PPP1R9BQ96SB3 815 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 TRIM17Q9Y577 477 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 IVNS1ABPQ9Y6Y0 642 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 TMEM110-MUSTN1A8MSY1 372 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 SGSM2O43147 1006 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 CAVIN1Q6NZI2 390 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 SPATS2Q86XZ4 545 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 HOMER3Q9NSC5 361 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 ZMAT5Q9UDW3 170 aaKnown RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 ZKSCAN5Q9Y2L8 839 aa4.95□□□□□ -1.62
SCN3A-209ENST00000639244 ARIH1Q9Y4X5 557 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-209ENST00000639244 TONSLQ96HA7 1378 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 GOLGA6L4A6NEF3 574 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 ZNF189O75820 626 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MMEP08473 750 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 SLFN14P0C7P3 912 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PPM1FP49593 454 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 PROSER2Q86WR7 435 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MAP3K14Q99558 947 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MRS2Q9HD23 443 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 A0A0G2JS52 829 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CYP11B2P19099 503 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 DHX8Q14562 1220 aaKnown RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MAP7D1Q3KQU3 841 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CEP135Q66GS9 1140 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 HDGFL2Q7Z4V5 671 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 GABPB2Q8TAK5 448 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 WDR66Q8TBY9 1149 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 TRIM4Q9C037 500 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CITO14578 2027 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CPLX1O14810 134 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 C21orf2O43822 256 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 TAF7Q15545 349 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 SH2D4BQ5SQS7 431 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MSANTD4Q8NCY6 345 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 CTNNBL1Q8WYA6 563 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 BCL2L13Q9BXK5 485 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MYCLP1P12525 358 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-209ENST00000639244 HSPA4P34932 840 aa4.94□□□□□ -1.62
SCN3A-209ENST00000639244 MAPRE1Q15691 268 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms