RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	GRN	P28799	593 aa	Known RBP	3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	SH3PXD2A	Q5TCZ1	1133 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	BEND4	Q6ZU67	534 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	CLEC10A	Q8IUN9	316 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	MAP4K3	Q8IVH8	894 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	ZNF280C	Q8ND82	737 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	GIMAP7	Q8NHV1	300 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	TTC9	Q92623	222 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	MFSD14A	Q96MC6	490 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	FAM83C	Q9BQN1	747 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	GSX2	Q9BZM3	304 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	CARMIL2	Q6F5E8	1435 aa		3.6	□□□□□ -1.83
LMBR1-222	ENST00000638959	SERTM1	A2A2V5	107 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	BACH1	O14867	736 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	WISP1	O95388	367 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	FOSL1	P15407	271 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	EIF2AK2	P19525	551 aa	Known RBP	3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	CCIN	Q13939	588 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	SETDB1	Q15047	1291 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	TMEM259	Q4ZIN3	620 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	TBCEL	Q5QJ74	424 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	GDF6	Q6KF10	455 aa	Predicted RBP	3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	LCNL1	Q6ZST4	164 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	FAM20C	Q8IXL6	584 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	FAM46A	Q96IP4	442 aa	Known RBP	3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	SUSD3	Q96L08	255 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	OSBPL1A	Q9BXW6	950 aa		3.59	□□□□□ -1.83
LMBR1-222	ENST00000638959	ZBTB42	B2RXF5	422 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	SART1	O43290	800 aa	Known RBP	3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	PSPN	O60542	156 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	BMP3	P12645	472 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	CFP	P27918	469 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	KRTAP1-1	Q07627	177 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	DHX32	Q7L7V1	743 aa	Known RBP	3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	BTLA	Q7Z6A9	289 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	SLC9A9	Q8IVB4	645 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	PHTF2	Q8N3S3	785 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	FBXL6	Q8N531	539 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	IL22RA1	Q8N6P7	574 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	FAM168A	Q92567	244 aa		3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	RTN4	Q9NQC3	1192 aa	Known RBP	3.58	□□□□□ -1.84
LMBR1-222	ENST00000638959	ZSCAN22	P10073	491 aa	Predicted RBP	3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	HFE2	Q6ZVN8	426 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	TTLL10	Q6ZVT0	673 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	KRT25	Q7Z3Z0	450 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	LRRC56	Q8IYG6	542 aa	Predicted RBP	3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	TRPM4	Q8TD43	1214 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	PHACTR1	Q9C0D0	580 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	PAK6	Q9NQU5	681 aa	Predicted RBP	3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	BSDC1	Q9NW68	430 aa	Predicted RBP	3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	RAPGEFL1	Q9UHV5	662 aa		3.57	□□□□□ -1.84
LMBR1-222	ENST00000638959	RAP1GAP	P47736	663 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	GPLD1	P80108	840 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	C1orf53	Q5VUE5	145 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	FAM84A	Q96KN4	292 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	CHMP3	Q9Y3E7	222 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	HCN4	Q9Y3Q4	1203 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	NDUFB9	Q9Y6M9	179 aa		3.56	□□□□□ -1.84
LMBR1-222	ENST00000638959	GPR37L1	O60883	481 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	F13B	P05160	661 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	CTSW	P56202	376 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	ECM1	Q16610	540 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	CPSF6	Q16630	551 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	C1QL4	Q86Z23	238 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	CILP2	Q8IUL8	1156 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	PLD4	Q96BZ4	506 aa		3.55	□□□□□ -1.84
LMBR1-222	ENST00000638959	MAP3K6	O95382	1288 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	ARID4A	P29374	1257 aa	Predicted RBP	3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	EIF4G2	P78344	907 aa	Known RBP eCLIP	3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	PLCL1	Q15111	1095 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	MAP7D1	Q3KQU3	841 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	ZNF792	Q3KQV3	632 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	SIAH1	Q8IUQ4	282 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	PLPP7	Q8NBV4	271 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	GALNT11	Q8NCW6	608 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	TMEM40	Q8WWA1	233 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	ZNF358	Q9NW07	568 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	CHIC2	Q9UKJ5	165 aa		3.54	□□□□□ -1.84
LMBR1-222	ENST00000638959	CYP26A1	O43174	497 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	INHBB	P09529	407 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	RARA	P10276	462 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	SKI	P12755	728 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	CD68	P34810	354 aa	Predicted RBP	3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	PREP	P48147	710 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	EPHA4	P54764	986 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	PSMA6	P60900	246 aa	Known RBP	3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	PSME1	Q06323	249 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	MESP2	Q0VG99	397 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	HIF1A	Q16665	826 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	DUOXA2	Q1HG44	320 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	TNS4	Q8IZW8	715 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	COL26A1	Q96A83	441 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	ZFAT	Q9P243	1243 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	HIF3A	Q9Y2N7	669 aa		3.53	□□□□□ -1.84
LMBR1-222	ENST00000638959	LRRC10B	A6NIK2	292 aa		3.52	□□□□□ -1.85
LMBR1-222	ENST00000638959	GAS2	O43903	313 aa	Known RBP	3.52	□□□□□ -1.85

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