RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
PRAMEF13-202ENST00000638454 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
PRAMEF13-202ENST00000638454 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
PRAMEF13-202ENST00000638454 ITPK1Q13572 414 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 INTS5Q6P9B9 1019 aaKnown RBP13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
PRAMEF13-202ENST00000638454 RREB1Q92766 1687 aa13.1□□□□□ -0.31
PRAMEF13-202ENST00000638454 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
PRAMEF13-202ENST00000638454 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
PRAMEF13-202ENST00000638454 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
PRAMEF13-202ENST00000638454 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 H7C1W4 665 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 SUCLG2Q96I99 432 aa13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
PRAMEF13-202ENST00000638454 LY75O60449 1722 aa13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 PCCAP05165 728 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 LINC00116Q8NCU8 138 aa13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
PRAMEF13-202ENST00000638454 BRWD3Q6RI45 1802 aa13.07□□□□□ -0.32
PRAMEF13-202ENST00000638454 ZPR1O75312 459 aa13.07□□□□□ -0.32
PRAMEF13-202ENST00000638454 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
PRAMEF13-202ENST00000638454 EXOC6BQ9Y2D4 811 aa13.07□□□□□ -0.32
PRAMEF13-202ENST00000638454 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
PRAMEF13-202ENST00000638454 ANKRD36CQ5JPF3 1778 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 APBB1O00213 710 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 GNPATO15228 680 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 TRIM37O94972 964 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 DDRGK1Q96HY6 314 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 PHF12Q96QT6 1004 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 NOP58Q9Y2X3 529 aaKnown RBP13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 CHMP3Q9Y3E7 222 aa13.06□□□□□ -0.32
PRAMEF13-202ENST00000638454 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
PRAMEF13-202ENST00000638454 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
PRAMEF13-202ENST00000638454 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
PRAMEF13-202ENST00000638454 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
PRAMEF13-202ENST00000638454 UPF2Q9HAU5 1272 aaKnown RBP13.05□□□□□ -0.32
PRAMEF13-202ENST00000638454 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 GPTP24298 496 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 CASP7P55210 303 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 DSG2Q14126 1118 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 HLFQ16534 295 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
PRAMEF13-202ENST00000638454 PLSCR1O15162 318 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 RFC4P35249 363 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 CASC1Q6TDU7 716 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 COPRSQ9NQ92 184 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 NUP98P52948 1817 aa13.03□□□□□ -0.32
PRAMEF13-202ENST00000638454 C4BP0C0L5 1744 aa13.02□□□□□ -0.32
PRAMEF13-202ENST00000638454 MYH14Q7Z406 1995 aaKnown RBP13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 AMHR2Q16671 573 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 KAZALD1Q96I82 304 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 AOX1Q06278 1338 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 BCORQ6W2J9 1755 aa13.02□□□□□ -0.33
PRAMEF13-202ENST00000638454 IRS4O14654 1257 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 ERC2O15083 957 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 PDE8AO60658 829 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 APBA3O96018 575 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 MX1P20591 662 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 SSFA2P28290 1259 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
PRAMEF13-202ENST00000638454 SCN7AQ01118 1682 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms