RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 IFIT5Q13325 482 aaKnown RBP14.52□□□□□ -0.09
CLN6-223ENST00000637823 TPTE2Q6XPS3 522 aa14.52□□□□□ -0.09
CLN6-223ENST00000637823 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
CLN6-223ENST00000637823 SASH1O94885 1247 aa14.51□□□□□ -0.09
CLN6-223ENST00000637823 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
CLN6-223ENST00000637823 GTF2E1P29083 439 aaPredicted RBP14.51□□□□□ -0.09
CLN6-223ENST00000637823 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
CLN6-223ENST00000637823 NBPF5PQ86XG9 351 aaPredicted RBP14.51□□□□□ -0.09
CLN6-223ENST00000637823 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
CLN6-223ENST00000637823 SIL1Q9H173 461 aa14.51□□□□□ -0.09
CLN6-223ENST00000637823 CARMIL3Q8ND23 1372 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 ANKRD18BA2A2Z9 1011 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 CIAO1O76071 339 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 TM4SF1P30408 202 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 NFIXQ14938 502 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 COL23A1Q86Y22 540 aaPredicted RBP14.5□□□□□ -0.09
CLN6-223ENST00000637823 NUTM1Q86Y26 1132 aa14.5□□□□□ -0.09
CLN6-223ENST00000637823 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
CLN6-223ENST00000637823 RTL9Q8NET4 1388 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 EYA2O00167 538 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 ITGA6P23229 1130 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 IL15P40933 162 aaPredicted RBP14.49□□□□□ -0.09
CLN6-223ENST00000637823 SLC15A2Q16348 729 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 FAM161AQ3B820 660 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 NLGN1Q8N2Q7 840 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 BCL11AQ9H165 835 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 OSBPL3Q9H4L5 887 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 GREM2Q9H772 168 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 IL1RAPL2Q9NP60 686 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 STK32BQ9NY57 414 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 STAP2Q9UGK3 403 aa14.49□□□□□ -0.09
CLN6-223ENST00000637823 SALL3Q9BXA9 1300 aa14.48□□□□□ -0.09
CLN6-223ENST00000637823 MSH5O43196 834 aa14.48□□□□□ -0.09
CLN6-223ENST00000637823 PDE1AP54750 535 aa14.48□□□□□ -0.09
CLN6-223ENST00000637823 SF3B3Q15393 1217 aaKnown RBP14.48□□□□□ -0.09
CLN6-223ENST00000637823 ATG9AQ7Z3C6 839 aa14.48□□□□□ -0.09
CLN6-223ENST00000637823 OTUD7AQ8TE49 926 aaPredicted RBP14.48□□□□□ -0.09
CLN6-223ENST00000637823 ZNF594Q96JF6 807 aaPredicted RBP14.48□□□□□ -0.09
CLN6-223ENST00000637823 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
CLN6-223ENST00000637823 AOX1Q06278 1338 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 MX1P20591 662 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 BMP2KLQ5H9B9 411 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 DEFB132Q7Z7B7 95 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 NLRP3Q96P20 1036 aa14.47□□□□□ -0.09
CLN6-223ENST00000637823 SPEF2Q9C093 1822 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 SERPINB2P05120 415 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 IFIT2P09913 472 aaKnown RBP14.46□□□□□ -0.09
CLN6-223ENST00000637823 TFCP2Q12800 502 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 TTC22Q5TAA0 569 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 LDHAL6AQ6ZMR3 332 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 GPR108Q9NPR9 543 aa14.46□□□□□ -0.09
CLN6-223ENST00000637823 AK9Q5TCS8 1911 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 NPHP1O15259 732 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 TAF1P21675 1872 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 LRRC24Q50LG9 513 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 AACSQ86V21 672 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 CNBD1Q8NA66 436 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 PUS3Q9BZE2 481 aaKnown RBP14.45□□□□□ -0.1
CLN6-223ENST00000637823 CEP126Q9P2H0 1117 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
CLN6-223ENST00000637823 TTC41PQ6P2S7 1318 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 POLRMTO00411 1230 aaKnown RBP14.44□□□□□ -0.1
CLN6-223ENST00000637823 C8orf34Q49A92 452 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 TNNI3KQ59H18 835 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
CLN6-223ENST00000637823 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
CLN6-223ENST00000637823 TSHZ2Q9NRE2 1034 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 FPGT-TNNI3KV9GXZ4 949 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 ABCC12Q96J65 1359 aa14.44□□□□□ -0.1
CLN6-223ENST00000637823 ST5P78524 1137 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 DDR1Q08345 913 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 PRR5LQ6MZQ0 368 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 C3orf67Q6ZVT6 689 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 CDC5LQ99459 802 aaKnown RBP14.43□□□□□ -0.1
CLN6-223ENST00000637823 SEC31BQ9NQW1 1179 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 CNNM1Q9NRU3 951 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 AKAP2Q9Y2D5 859 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.43□□□□□ -0.1
CLN6-223ENST00000637823 NRXN2Q9P2S2 1712 aa14.43□□□□□ -0.1
CLN6-223ENST00000637823 ERC2O15083 957 aa14.42□□□□□ -0.1
CLN6-223ENST00000637823 IGHMBP2P38935 993 aaKnown RBP14.42□□□□□ -0.1
CLN6-223ENST00000637823 MPHOSPH8Q99549 860 aa14.42□□□□□ -0.1
CLN6-223ENST00000637823 CCDC8Q9H0W5 538 aaPredicted RBP14.42□□□□□ -0.1
CLN6-223ENST00000637823 ECHDC1Q9NTX5 307 aa14.42□□□□□ -0.1
CLN6-223ENST00000637823 MROH5Q6ZUA9 1318 aa14.41□□□□□ -0.1
CLN6-223ENST00000637823 GLRX3O76003 335 aaKnown RBP14.41□□□□□ -0.1
CLN6-223ENST00000637823 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
CLN6-223ENST00000637823 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
CLN6-223ENST00000637823 ANKRD18AQ8IVF6 992 aa14.41□□□□□ -0.1
CLN6-223ENST00000637823 LRP5O75197 1615 aa14.41□□□□□ -0.1
CLN6-223ENST00000637823 TNRC6CQ9HCJ0 1690 aaKnown RBP14.4□□□□□ -0.1
CLN6-223ENST00000637823 DDX46Q7L014 1031 aaKnown RBP14.4□□□□□ -0.1
CLN6-223ENST00000637823 CCDC24Q8N4L8 307 aa14.4□□□□□ -0.1
CLN6-223ENST00000637823 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 718.1 ms