RNA–Protein interactions for RNA: ENST00000635885.1

SYNGAP1-209, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 191 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-209ENST00000635885 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
SYNGAP1-209ENST00000635885 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 CPA1P15085 419 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 ADCK5Q3MIX3 580 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 ARXQ96QS3 562 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 HAUS7Q99871 368 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 ASAP1Q9ULH1 1129 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 CYP46A1Q9Y6A2 500 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
SYNGAP1-209ENST00000635885 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 EYA2O00167 538 aa12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 IL15P40933 162 aaPredicted RBP12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 KCNJ4P48050 445 aa12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
SYNGAP1-209ENST00000635885 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 TAF5LO75529 589 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 CIAO1O76071 339 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 LARGE1O95461 756 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZKSCAN1P17029 563 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 PSMA5P28066 241 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZNF445P59923 1031 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 KIF6Q6ZMV9 814 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 GPT2Q8TD30 523 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZNF609O15014 1411 aa12.42□□□□□ -0.42
SYNGAP1-209ENST00000635885 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 STARD3NLO95772 234 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 PCCAP05165 728 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 LRRC24Q50LG9 513 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 USPL1Q5W0Q7 1092 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 SH2B1Q9NRF2 756 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 SMC3Q9UQE7 1217 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
SYNGAP1-209ENST00000635885 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 BCL9O00512 1426 aa12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 NEUROD6Q96NK8 337 aa12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
SYNGAP1-209ENST00000635885 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 EXOC5O00471 708 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 TIMM10P62072 90 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 ST3GAL1Q11201 340 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 ZSCAN23Q3MJ62 389 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 MCMDC2Q4G0Z9 681 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 BLOC1S2Q6QNY1 142 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-209ENST00000635885 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 MBD3O95983 291 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 CSF1RP07333 972 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 ME3Q16798 604 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 CCDC129Q6ZRS4 1044 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 FAM43AQ8N2R8 423 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 PAG1Q9NWQ8 432 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 TAF6LQ9Y6J9 622 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 RREB1Q92766 1687 aa12.38□□□□□ -0.43
SYNGAP1-209ENST00000635885 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
SYNGAP1-209ENST00000635885 MYH15Q9Y2K3 1946 aa12.37□□□□□ -0.43
SYNGAP1-209ENST00000635885 STX6O43752 255 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms