RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 TMEM88BA6NKF7 163 aa16.34■□□□□ 0.21
PTPN11-206ENST00000635652 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
PTPN11-206ENST00000635652 COL13A1Q5TAT6 717 aaPredicted RBP16.34■□□□□ 0.21
PTPN11-206ENST00000635652 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
PTPN11-206ENST00000635652 EPS15P42566 896 aa16.33■□□□□ 0.2
PTPN11-206ENST00000635652 SCNN1DP51172 638 aa16.33■□□□□ 0.2
PTPN11-206ENST00000635652 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
PTPN11-206ENST00000635652 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
PTPN11-206ENST00000635652 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
PTPN11-206ENST00000635652 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
PTPN11-206ENST00000635652 PHAXQ9H814 394 aaKnown RBP16.32■□□□□ 0.2
PTPN11-206ENST00000635652 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
PTPN11-206ENST00000635652 CNTNAP1P78357 1384 aa16.31■□□□□ 0.2
PTPN11-206ENST00000635652 CXCL9Q07325 125 aa16.31■□□□□ 0.2
PTPN11-206ENST00000635652 TMC4Q7Z404 712 aa16.31■□□□□ 0.2
PTPN11-206ENST00000635652 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
PTPN11-206ENST00000635652 LTBP1Q14766 1721 aa16.31■□□□□ 0.2
PTPN11-206ENST00000635652 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-206ENST00000635652 KIAA2012Q0VF49 1180 aa16.3■□□□□ 0.2
PTPN11-206ENST00000635652 TRIM28Q13263 835 aaKnown RBP16.3■□□□□ 0.2
PTPN11-206ENST00000635652 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
PTPN11-206ENST00000635652 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-206ENST00000635652 RAD17O75943 681 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 CIAPIN1Q6FI81 312 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
PTPN11-206ENST00000635652 MYD88Q99836 296 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 CHMP4AQ9BY43 222 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
PTPN11-206ENST00000635652 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
PTPN11-206ENST00000635652 VEGFBP49765 207 aa16.28■□□□□ 0.2
PTPN11-206ENST00000635652 GMPSP49915 693 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-206ENST00000635652 TNIP1Q15025 636 aa16.28■□□□□ 0.2
PTPN11-206ENST00000635652 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
PTPN11-206ENST00000635652 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
PTPN11-206ENST00000635652 TNS4Q8IZW8 715 aa16.28■□□□□ 0.2
PTPN11-206ENST00000635652 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
PTPN11-206ENST00000635652 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
PTPN11-206ENST00000635652 C6orf229H3BNL8 230 aa16.27■□□□□ 0.2
PTPN11-206ENST00000635652 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
PTPN11-206ENST00000635652 HSP90B1P14625 803 aaKnown RBP16.27■□□□□ 0.2
PTPN11-206ENST00000635652 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
PTPN11-206ENST00000635652 DEFB115Q30KQ5 88 aa16.27■□□□□ 0.2
PTPN11-206ENST00000635652 ZBTB38Q8NAP3 1195 aaPredicted RBP16.27■□□□□ 0.2
PTPN11-206ENST00000635652 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
PTPN11-206ENST00000635652 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
PTPN11-206ENST00000635652 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
PTPN11-206ENST00000635652 TSR2Q969E8 191 aaKnown RBP16.26■□□□□ 0.19
PTPN11-206ENST00000635652 GPSM2P81274 684 aa16.25■□□□□ 0.19
PTPN11-206ENST00000635652 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.192e-9■□□□□ 8.9
PTPN11-206ENST00000635652 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
PTPN11-206ENST00000635652 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-206ENST00000635652 CWC25Q9NXE8 425 aaPredicted RBP16.25■□□□□ 0.19
PTPN11-206ENST00000635652 LRRC37AA6NMS7 1700 aa16.25■□□□□ 0.19
PTPN11-206ENST00000635652 RASSF10A6NK89 507 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 TRAF5O00463 557 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 CAPN15O75808 1086 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 METTL22Q9BUU2 404 aaPredicted RBP16.24■□□□□ 0.19
PTPN11-206ENST00000635652 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 DBNDD1Q9H9R9 158 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 POLLQ9UGP5 575 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 CNOT7Q9UIV1 285 aaKnown RBP16.24■□□□□ 0.19
PTPN11-206ENST00000635652 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
PTPN11-206ENST00000635652 DUOX1Q9NRD9 1551 aa16.23■□□□□ 0.19
PTPN11-206ENST00000635652 H7C1D1 291 aa16.23■□□□□ 0.19
PTPN11-206ENST00000635652 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-206ENST00000635652 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
PTPN11-206ENST00000635652 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-206ENST00000635652 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
PTPN11-206ENST00000635652 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
PTPN11-206ENST00000635652 EYA3Q99504 573 aa16.23■□□□□ 0.19
PTPN11-206ENST00000635652 CDHR2Q9BYE9 1310 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 FOXN1O15353 648 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 PDE8AO60658 829 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-206ENST00000635652 DOK7Q18PE1 504 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 CCDC27Q2M243 656 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 TBC1D16Q8TBP0 767 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-206ENST00000635652 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
PTPN11-206ENST00000635652 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-206ENST00000635652 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.19
PTPN11-206ENST00000635652 COL4A1P02462 1669 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 G3V3G9 751 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 PSMD14O00487 310 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 GRM1Q13255 1194 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-206ENST00000635652 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 CST9Q5W186 159 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 KSR2Q6VAB6 950 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
PTPN11-206ENST00000635652 ZC3H12CQ9C0D7 883 aaKnown RBP16.21■□□□□ 0.19
PTPN11-206ENST00000635652 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms