RNA–Protein interactions for RNA: ENST00000635252.1

PRDM9-203, Transcript of PR/SET domain 9, humanhuman

TSL 5

Gene PRDM9, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-203ENST00000635252 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
PRDM9-203ENST00000635252 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
PRDM9-203ENST00000635252 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
PRDM9-203ENST00000635252 SUCLG2Q96I99 432 aa16.99■□□□□ 0.31
PRDM9-203ENST00000635252 MEIS3Q99687 375 aa16.99■□□□□ 0.31
PRDM9-203ENST00000635252 CTSWP56202 376 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 FOXO4P98177 505 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 MYH3P11055 1940 aa16.98■□□□□ 0.31
PRDM9-203ENST00000635252 GPR162Q16538 588 aa16.97■□□□□ 0.31
PRDM9-203ENST00000635252 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
PRDM9-203ENST00000635252 OLFM4Q6UX06 510 aa16.97■□□□□ 0.31
PRDM9-203ENST00000635252 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
PRDM9-203ENST00000635252 RBM17Q96I25 401 aaKnown RBP16.97■□□□□ 0.31
PRDM9-203ENST00000635252 PLA2G12BQ9BX93 195 aa16.97■□□□□ 0.31
PRDM9-203ENST00000635252 CNKSR1Q969H4 720 aa16.96■□□□□ 0.31
PRDM9-203ENST00000635252 GREM2Q9H772 168 aa16.96■□□□□ 0.31
PRDM9-203ENST00000635252 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.3
PRDM9-203ENST00000635252 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.3
PRDM9-203ENST00000635252 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.3
PRDM9-203ENST00000635252 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.3
PRDM9-203ENST00000635252 CELF1Q92879 486 aaKnown RBP16.96■□□□□ 0.3
PRDM9-203ENST00000635252 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.3
PRDM9-203ENST00000635252 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.3
PRDM9-203ENST00000635252 COG6Q9Y2V7 657 aa16.96■□□□□ 0.3
PRDM9-203ENST00000635252 CSF1RP07333 972 aa16.95■□□□□ 0.3
PRDM9-203ENST00000635252 UBTFL1P0CB47 393 aaPredicted RBP16.95■□□□□ 0.3
PRDM9-203ENST00000635252 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
PRDM9-203ENST00000635252 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
PRDM9-203ENST00000635252 ANKRD44Q8N8A2 993 aa16.95■□□□□ 0.3
PRDM9-203ENST00000635252 C21orf2O43822 256 aa16.94■□□□□ 0.3
PRDM9-203ENST00000635252 ALDH1B1P30837 517 aa16.94■□□□□ 0.3
PRDM9-203ENST00000635252 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
PRDM9-203ENST00000635252 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
PRDM9-203ENST00000635252 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
PRDM9-203ENST00000635252 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
PRDM9-203ENST00000635252 LRRFIP2Q9Y608 721 aaKnown RBP16.93■□□□□ 0.3
PRDM9-203ENST00000635252 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
PRDM9-203ENST00000635252 MS4A1P11836 297 aa16.92■□□□□ 0.3
PRDM9-203ENST00000635252 GRAPQ13588 217 aa16.92■□□□□ 0.3
PRDM9-203ENST00000635252 GRAPLQ8TC17 118 aaPredicted RBP16.92■□□□□ 0.3
PRDM9-203ENST00000635252 SUPT16HQ9Y5B9 1047 aaKnown RBP16.92■□□□□ 0.3
PRDM9-203ENST00000635252 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
PRDM9-203ENST00000635252 ITGA6P23229 1130 aa16.91■□□□□ 0.3
PRDM9-203ENST00000635252 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
PRDM9-203ENST00000635252 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
PRDM9-203ENST00000635252 C1orf115Q9H7X2 142 aa16.91■□□□□ 0.3
PRDM9-203ENST00000635252 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
PRDM9-203ENST00000635252 GNAI3P08754 354 aa16.91■□□□□ 0.3
PRDM9-203ENST00000635252 RPS8P62241 208 aaKnown RBP16.91■□□□□ 0.3
PRDM9-203ENST00000635252 RABL6Q3YEC7 729 aaPredicted RBP16.91■□□□□ 0.3
PRDM9-203ENST00000635252 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
PRDM9-203ENST00000635252 BBOX1O75936 387 aa16.9■□□□□ 0.3
PRDM9-203ENST00000635252 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
PRDM9-203ENST00000635252 ZNF594Q96JF6 807 aaPredicted RBP16.9■□□□□ 0.3
PRDM9-203ENST00000635252 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
PRDM9-203ENST00000635252 GNAI2P04899 355 aa16.88■□□□□ 0.29
PRDM9-203ENST00000635252 IFIT5Q13325 482 aaKnown RBP16.88■□□□□ 0.29
PRDM9-203ENST00000635252 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
PRDM9-203ENST00000635252 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 NFKBIEO00221 500 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 GRIN3BO60391 1043 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 RASSF7Q02833 373 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 ANKRD18AQ8IVF6 992 aa16.87■□□□□ 0.29
PRDM9-203ENST00000635252 CDC5LQ99459 802 aaKnown RBP16.87■□□□□ 0.29
PRDM9-203ENST00000635252 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 DDX19BQ9UMR2 479 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 SNED1Q8TER0 1413 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 PRELPP51888 382 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 CCDC93Q567U6 631 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
PRDM9-203ENST00000635252 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
PRDM9-203ENST00000635252 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
PRDM9-203ENST00000635252 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
PRDM9-203ENST00000635252 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
PRDM9-203ENST00000635252 LRRC37AA6NMS7 1700 aa16.85■□□□□ 0.29
PRDM9-203ENST00000635252 PNMA6EA0A0J9YXQ4 647 aa16.84■□□□□ 0.29
PRDM9-203ENST00000635252 IGHMBP2P38935 993 aaKnown RBP16.84■□□□□ 0.29
PRDM9-203ENST00000635252 GPSM2P81274 684 aa16.84■□□□□ 0.29
PRDM9-203ENST00000635252 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
PRDM9-203ENST00000635252 MPHOSPH8Q99549 860 aa16.84■□□□□ 0.29
PRDM9-203ENST00000635252 BSDC1Q9NW68 430 aaPredicted RBP16.84■□□□□ 0.29
PRDM9-203ENST00000635252 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
PRDM9-203ENST00000635252 SRGAP3O43295 1099 aa16.83■□□□□ 0.28
PRDM9-203ENST00000635252 IRX6P78412 446 aaPredicted RBP16.83■□□□□ 0.28
PRDM9-203ENST00000635252 SOGA3Q5TF21 947 aa16.83■□□□□ 0.28
PRDM9-203ENST00000635252 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
PRDM9-203ENST00000635252 MINPP1Q9UNW1 487 aa16.83■□□□□ 0.28
PRDM9-203ENST00000635252 NSFL1CQ9UNZ2 370 aaKnown RBP16.83■□□□□ 0.28
PRDM9-203ENST00000635252 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
PRDM9-203ENST00000635252 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
PRDM9-203ENST00000635252 MTX1Q13505 466 aa16.82■□□□□ 0.28
PRDM9-203ENST00000635252 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
PRDM9-203ENST00000635252 CC2D2BQ6DHV5 1058 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms