RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
SF1-221ENST00000633899 KDM2BQ8NHM5 1336 aa26.53■■□□□ 1.84
SF1-221ENST00000633899 CT47B1P0C2W7 299 aaPredicted RBP26.52■■□□□ 1.84
SF1-221ENST00000633899 CCDC152Q4G0S7 254 aa26.52■■□□□ 1.84
SF1-221ENST00000633899 GCKRQ14397 625 aa26.51■■□□□ 1.83
SF1-221ENST00000633899 UBE3BQ7Z3V4 1068 aa26.51■■□□□ 1.83
SF1-221ENST00000633899 TMC4Q7Z404 712 aa26.51■■□□□ 1.83
SF1-221ENST00000633899 MRPL50Q8N5N7 158 aaKnown RBP26.51■■□□□ 1.83
SF1-221ENST00000633899 PSMD1Q99460 953 aa26.51■■□□□ 1.83
SF1-221ENST00000633899 ZNF277Q9NRM2 450 aaPredicted RBP26.51■■□□□ 1.83
SF1-221ENST00000633899 ALDH1L2Q3SY69 923 aa26.5■■□□□ 1.83
SF1-221ENST00000633899 SLC4A10Q6U841 1118 aa26.5■■□□□ 1.83
SF1-221ENST00000633899 SSH1Q8WYL5 1049 aa26.5■■□□□ 1.83
SF1-221ENST00000633899 BCL2L13Q9BXK5 485 aa26.5■■□□□ 1.83
SF1-221ENST00000633899 SP8Q8IXZ3 490 aa26.49■■□□□ 1.83
SF1-221ENST00000633899 SMC4Q9NTJ3 1288 aa26.49■■□□□ 1.83
SF1-221ENST00000633899 PTPRCP08575 1304 aa26.48■■□□□ 1.83
SF1-221ENST00000633899 IARSP41252 1262 aaKnown RBP26.48■■□□□ 1.83
SF1-221ENST00000633899 CCDC85AQ96PX6 553 aaPredicted RBP26.48■■□□□ 1.83
SF1-221ENST00000633899 SNED1Q8TER0 1413 aa26.48■■□□□ 1.83
SF1-221ENST00000633899 H7C1W4 665 aa26.47■■□□□ 1.83
SF1-221ENST00000633899 CTSWP56202 376 aa26.47■■□□□ 1.83
SF1-221ENST00000633899 BEND3Q5T5X7 828 aa26.47■■□□□ 1.83
SF1-221ENST00000633899 DPY19L2Q6NUT2 758 aa26.47■■□□□ 1.83
SF1-221ENST00000633899 CELF1Q92879 486 aaKnown RBP26.47■■□□□ 1.83
SF1-221ENST00000633899 LRRC37AA6NMS7 1700 aa26.46■■□□□ 1.83
SF1-221ENST00000633899 DPP8Q6V1X1 898 aaPredicted RBP26.46■■□□□ 1.83
SF1-221ENST00000633899 MPNDQ8N594 471 aa26.46■■□□□ 1.83
SF1-221ENST00000633899 SUPT20HQ8NEM7 779 aa26.46■■□□□ 1.83
SF1-221ENST00000633899 GLTPD2A6NH11 291 aa26.45■■□□□ 1.82
SF1-221ENST00000633899 SLC51AQ86UW1 340 aa26.45■■□□□ 1.82
SF1-221ENST00000633899 JDP2Q8WYK2 163 aa26.45■■□□□ 1.82
SF1-221ENST00000633899 SRCIN1Q9C0H9 1055 aa26.45■■□□□ 1.82
SF1-221ENST00000633899 RPS8P62241 208 aaKnown RBP26.44■■□□□ 1.82
SF1-221ENST00000633899 NMRK2Q9NPI5 230 aa26.44■■□□□ 1.82
SF1-221ENST00000633899 SEC31BQ9NQW1 1179 aa26.44■■□□□ 1.82
SF1-221ENST00000633899 ALDH1L1O75891 902 aa26.43■■□□□ 1.82
SF1-221ENST00000633899 C9orf78Q9NZ63 289 aaPredicted RBP26.43■■□□□ 1.82
SF1-221ENST00000633899 SPEF2Q9C093 1822 aa26.43■■□□□ 1.82
SF1-221ENST00000633899 LARGE2Q8N3Y3 721 aa26.42■■□□□ 1.82
SF1-221ENST00000633899 CDC5LQ99459 802 aaKnown RBP26.42■■□□□ 1.82
SF1-221ENST00000633899 PPIP5K2O43314 1243 aa26.41■■□□□ 1.82
SF1-221ENST00000633899 ANKRD18AQ8IVF6 992 aa26.41■■□□□ 1.82
SF1-221ENST00000633899 C16orf71Q8IYS4 520 aaPredicted RBP26.41■■□□□ 1.82
SF1-221ENST00000633899 TTLL11Q8NHH1 800 aa26.41■■□□□ 1.82
SF1-221ENST00000633899 PLA2G12BQ9BX93 195 aa26.41■■□□□ 1.82
SF1-221ENST00000633899 COL4A1P02462 1669 aa26.41■■□□□ 1.82
SF1-221ENST00000633899 GRM8O00222 908 aa26.4■■□□□ 1.82
SF1-221ENST00000633899 KIF3CO14782 793 aa26.4■■□□□ 1.82
SF1-221ENST00000633899 CASP7P55210 303 aa26.4■■□□□ 1.82
SF1-221ENST00000633899 RRAGCQ9HB90 399 aa26.4■■□□□ 1.82
SF1-221ENST00000633899 NSFL1CQ9UNZ2 370 aaKnown RBP26.4■■□□□ 1.82
SF1-221ENST00000633899 ZBED9Q6R2W3 1325 aa26.39■■□□□ 1.82
SF1-221ENST00000633899 RTFDC1Q9BY42 306 aaPredicted RBP26.39■■□□□ 1.82
SF1-221ENST00000633899 GREM2Q9H772 168 aa26.39■■□□□ 1.82
SF1-221ENST00000633899 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
SF1-221ENST00000633899 NIM1KQ8IY84 436 aa26.38■■□□□ 1.81
SF1-221ENST00000633899 VPS33BQ9H267 617 aa26.38■■□□□ 1.81
SF1-221ENST00000633899 WDR90Q96KV7 1748 aa26.38■■□□□ 1.81
SF1-221ENST00000633899 RTL9Q8NET4 1388 aa26.37■■□□□ 1.81
SF1-221ENST00000633899 EIF6P56537 245 aaKnown RBP26.37■■□□□ 1.81
SF1-221ENST00000633899 AOC3Q16853 763 aa26.37■■□□□ 1.81
SF1-221ENST00000633899 RARSP54136 660 aaKnown RBP26.36■■□□□ 1.81
SF1-221ENST00000633899 CHMP3Q9Y3E7 222 aa26.36■■□□□ 1.81
SF1-221ENST00000633899 C6orf229H3BNL8 230 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 DDNO94850 711 aaPredicted RBP26.35■■□□□ 1.81
SF1-221ENST00000633899 VEGFAP15692 232 aaPredicted RBP26.35■■□□□ 1.81
SF1-221ENST00000633899 IGHMBP2P38935 993 aaKnown RBP26.35■■□□□ 1.81
SF1-221ENST00000633899 GPSM2P81274 684 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 FAM161AQ3B820 660 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 ANKIB1Q9P2G1 1089 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 NOB1Q9ULX3 412 aaKnown RBP26.35■■□□□ 1.81
SF1-221ENST00000633899 KIF16BQ96L93 1317 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 ZNF541Q9H0D2 1346 aa26.35■■□□□ 1.81
SF1-221ENST00000633899 DUOX1Q9NRD9 1551 aa26.34■■□□□ 1.81
SF1-221ENST00000633899 FZD9O00144 591 aa26.34■■□□□ 1.81
SF1-221ENST00000633899 ITGA6P23229 1130 aa26.34■■□□□ 1.81
SF1-221ENST00000633899 API5Q9BZZ5 524 aaKnown RBP26.34■■□□□ 1.81
SF1-221ENST00000633899 TOMM70O94826 608 aa26.33■■□□□ 1.81
SF1-221ENST00000633899 BRPF1P55201 1214 aaPredicted RBP26.33■■□□□ 1.81
SF1-221ENST00000633899 EYA3Q99504 573 aa26.33■■□□□ 1.81
SF1-221ENST00000633899 COL4A5P29400 1685 aa26.33■■□□□ 1.81
SF1-221ENST00000633899 LTBP1Q14766 1721 aa26.33■■□□□ 1.81
SF1-221ENST00000633899 ANKRD18BA2A2Z9 1011 aa26.32■■□□□ 1.8
SF1-221ENST00000633899 CSF1RP07333 972 aa26.32■■□□□ 1.8
SF1-221ENST00000633899 KIAA2012Q0VF49 1180 aa26.32■■□□□ 1.8
SF1-221ENST00000633899 SCN4AP35499 1836 aa26.31■■□□□ 1.8
SF1-221ENST00000633899 WASHC4Q2M389 1173 aa26.31■■□□□ 1.8
SF1-221ENST00000633899 MPHOSPH8Q99549 860 aa26.31■■□□□ 1.8
SF1-221ENST00000633899 GGA1Q9UJY5 639 aa26.31■■□□□ 1.8
SF1-221ENST00000633899 UFL1O94874 794 aa26.3■■□□□ 1.8
SF1-221ENST00000633899 CCT4P50991 539 aaKnown RBP26.3■■□□□ 1.8
SF1-221ENST00000633899 FOXO4P98177 505 aa26.3■■□□□ 1.8
SF1-221ENST00000633899 IFIT5Q13325 482 aaKnown RBP26.3■■□□□ 1.8
SF1-221ENST00000633899 BSDC1Q9NW68 430 aaPredicted RBP26.3■■□□□ 1.8
SF1-221ENST00000633899 PODXL2Q9NZ53 605 aa26.3■■□□□ 1.8
SF1-221ENST00000633899 GJA3Q9Y6H8 435 aa26.3■■□□□ 1.8
SF1-221ENST00000633899 XDHP47989 1333 aa26.3■■□□□ 1.8
SF1-221ENST00000633899 IQCA1LA6NCM1 817 aa26.29■■□□□ 1.8
SF1-221ENST00000633899 NBPF7P0C2Y1 421 aaPredicted RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms