RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 JCADQ9P266 1359 aa9.65□□□□□ -0.86
GPC3-204ENST00000631057 GLI3P10071 1580 aa9.65□□□□□ -0.86
GPC3-204ENST00000631057 F13A1P00488 732 aa9.65□□□□□ -0.86
GPC3-204ENST00000631057 MSNP26038 577 aaKnown RBP9.65□□□□□ -0.86
GPC3-204ENST00000631057 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
GPC3-204ENST00000631057 SIL1Q9H173 461 aa9.65□□□□□ -0.86
GPC3-204ENST00000631057 HMG20BQ9P0W2 317 aa9.65□□□□□ -0.86
GPC3-204ENST00000631057 MED23Q9ULK4 1368 aa9.65□□□□□ -0.87
GPC3-204ENST00000631057 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
GPC3-204ENST00000631057 SLC27A2O14975 620 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 LETM1O95202 739 aaPredicted RBP9.64□□□□□ -0.87
GPC3-204ENST00000631057 UBE2HP62256 183 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 ANKRD1Q15327 319 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 CCDC183Q5T5S1 534 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 FAM227BQ96M60 508 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
GPC3-204ENST00000631057 TLR7Q9NYK1 1049 aaKnown RBP9.64□□□□□ -0.87
GPC3-204ENST00000631057 LAMA4Q16363 1823 aa9.64□□□□□ -0.87
GPC3-204ENST00000631057 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
GPC3-204ENST00000631057 A0A0D9SFI3 127 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 CYP27B1O15528 508 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 GADD45BO75293 160 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 LARGE1O95461 756 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 CPA1P15085 419 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 ATP5JP18859 108 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 GJB2P29033 226 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 CABP4P57796 275 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 ADCK5Q3MIX3 580 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 RABL6Q3YEC7 729 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 FAM184AQ8NB25 1140 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 PAPPAQ13219 1627 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 TJP1Q07157 1748 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 XIRP1Q702N8 1843 aaKnown RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 SPEF2Q9C093 1822 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 STK25O00506 426 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 PDCP20941 246 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 MCM5P33992 734 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 RFX5P48382 616 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 KRT32Q14532 448 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 EPHA10Q5JZY3 1008 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 BLOC1S2Q6QNY1 142 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 USP16Q9Y5T5 823 aa9.63□□□□□ -0.87
GPC3-204ENST00000631057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.63□□□□□ -0.87
GPC3-204ENST00000631057 MYH15Q9Y2K3 1946 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
GPC3-204ENST00000631057 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 TSGA10IPQ3SY00 556 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 TNNI3KQ59H18 835 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 UBE3BQ7Z3V4 1068 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 ILDR1Q86SU0 546 aaPredicted RBP9.62□□□□□ -0.87
GPC3-204ENST00000631057 KLHDC4Q8TBB5 520 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
GPC3-204ENST00000631057 ZMYND15Q9H091 742 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 DBNLQ9UJU6 430 aaKnown RBP9.62□□□□□ -0.87
GPC3-204ENST00000631057 NOL7Q9UMY1 257 aaKnown RBP9.62□□□□□ -0.87
GPC3-204ENST00000631057 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 FPGT-TNNI3KV9GXZ4 949 aa9.62□□□□□ -0.87
GPC3-204ENST00000631057 A0A087WZG4 1122 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 TFCP2Q12800 502 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 ME3Q16798 604 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.61□□□□□ -0.87
GPC3-204ENST00000631057 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 TPCN1Q9ULQ1 816 aa9.61□□□□□ -0.87
GPC3-204ENST00000631057 PCDH11XQ9BZA7 1347 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 PCDH11YQ9BZA8 1340 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 VPS37CA5D8V6 355 aaPredicted RBP9.6□□□□□ -0.87
GPC3-204ENST00000631057 FIBPO43427 364 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 TAF5LO75529 589 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 CASP7P55210 303 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 USPL1Q5W0Q7 1092 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 RNF214Q8ND24 703 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 ZC3H15Q8WU90 426 aaKnown RBP9.6□□□□□ -0.87
GPC3-204ENST00000631057 DDX17Q92841 729 aaKnown RBP9.6□□□□□ -0.87
GPC3-204ENST00000631057 HAUS7Q99871 368 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 MYH7P12883 1935 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 SHANK3Q9BYB0 1731 aa9.6□□□□□ -0.87
GPC3-204ENST00000631057 ERVV-2B6SEH9 535 aa9.59□□□□□ -0.87
GPC3-204ENST00000631057 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
GPC3-204ENST00000631057 ZNF500O60304 480 aaPredicted RBP9.59□□□□□ -0.87
GPC3-204ENST00000631057 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
GPC3-204ENST00000631057 OFD1O75665 1012 aa9.59□□□□□ -0.87
GPC3-204ENST00000631057 ST3GAL1Q11201 340 aa9.59□□□□□ -0.87
GPC3-204ENST00000631057 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
GPC3-204ENST00000631057 ZNF589Q86UQ0 364 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms