RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 BBOX1O75936 387 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 HOXB7P09629 217 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 GNAI1P63096 354 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 COL13A1Q5TAT6 717 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 DDX46Q7L014 1031 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 TSPYL6Q8N831 410 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
SPTAN1-219ENST00000629378 SCNN1DP51172 638 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 GRAPQ13588 217 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 NIM1KQ8IY84 436 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 MPNDQ8N594 471 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
SPTAN1-219ENST00000629378 CXCL9Q07325 125 aa11.65□□□□□ -0.54
SPTAN1-219ENST00000629378 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
SPTAN1-219ENST00000629378 MYD88Q99836 296 aa11.65□□□□□ -0.54
SPTAN1-219ENST00000629378 RTFDC1Q9BY42 306 aaPredicted RBP11.65□□□□□ -0.54
SPTAN1-219ENST00000629378 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 HSPA1AP0DMV8 641 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 HSPA1BP0DMV9 641 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 SF3B3Q15393 1217 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 CDCA7LQ96GN5 454 aa11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
SPTAN1-219ENST00000629378 ZNF521Q96K83 1311 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 TMEM88BA6NKF7 163 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 YDJCA8MPS7 323 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 RIMBP2O15034 1052 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 RAD17O75943 681 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 TRIM28Q13263 835 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 SUPT20HQ8NEM7 779 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 SEC31BQ9NQW1 1179 aa11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-219ENST00000629378 DUOX1Q9NRD9 1551 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 TRAF5O00463 557 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 VEGFBP49765 207 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 GPSM2P81274 684 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 CALD1Q05682 793 aaKnown RBP11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 KIAA2012Q0VF49 1180 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 KCNQ5Q9NR82 932 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 GPRC5DQ9NZD1 345 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
SPTAN1-219ENST00000629378 LRRC37AA6NMS7 1700 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 CIAPIN1Q6FI81 312 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 G2E3Q7L622 706 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 ZBTB38Q8NAP3 1195 aaPredicted RBP11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
SPTAN1-219ENST00000629378 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 NEFLP07196 543 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 SLFN5Q08AF3 891 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 CCDC27Q2M243 656 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 WASHC4Q2M389 1173 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 USP50Q70EL3 339 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 ZBTB12Q9Y330 459 aaPredicted RBP11.6□□□□□ -0.55
SPTAN1-219ENST00000629378 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 IGKV5-2P06315 115 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 DEFB115Q30KQ5 88 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 CST9Q5W186 159 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 POLR2AP24928 1970 aaKnown RBP11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 TRPM7Q96QT4 1865 aa11.59□□□□□ -0.55
SPTAN1-219ENST00000629378 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
SPTAN1-219ENST00000629378 E9PSI1 815 aa11.58□□□□□ -0.56
SPTAN1-219ENST00000629378 PSMD14O00487 310 aa11.58□□□□□ -0.56
SPTAN1-219ENST00000629378 FOXN1O15353 648 aa11.58□□□□□ -0.56
SPTAN1-219ENST00000629378 PDE8AO60658 829 aa11.58□□□□□ -0.56
SPTAN1-219ENST00000629378 CAPN15O75808 1086 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms