RNA–Protein interactions for RNA: ENST00000629088.1

PNKP-222, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-222ENST00000629088 CALD1Q05682 793 aaKnown RBP20.58■□□□□ 0.89
PNKP-222ENST00000629088 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
PNKP-222ENST00000629088 HYPKQ9NX55 129 aa20.58■□□□□ 0.89
PNKP-222ENST00000629088 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
PNKP-222ENST00000629088 CST9Q5W186 159 aa20.57■□□□□ 0.88
PNKP-222ENST00000629088 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
PNKP-222ENST00000629088 ZNF853P0CG23 659 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 ANKRD13DQ6ZTN6 518 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 LAMB2P55268 1798 aa20.56■□□□□ 0.88
PNKP-222ENST00000629088 CXCL9Q07325 125 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 CYP4F22Q6NT55 531 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 PAXIP1Q6ZW49 1069 aaPredicted RBP20.55■□□□□ 0.88
PNKP-222ENST00000629088 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
PNKP-222ENST00000629088 MBIPQ9NS73 344 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 GPRC5DQ9NZD1 345 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 ZNRF3Q9ULT6 936 aa20.55■□□□□ 0.88
PNKP-222ENST00000629088 HCLS1P14317 486 aaPredicted RBP20.54■□□□□ 0.88
PNKP-222ENST00000629088 GNAI1P63096 354 aa20.54■□□□□ 0.88
PNKP-222ENST00000629088 GRM1Q13255 1194 aa20.54■□□□□ 0.88
PNKP-222ENST00000629088 GRAPQ13588 217 aa20.54■□□□□ 0.88
PNKP-222ENST00000629088 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
PNKP-222ENST00000629088 ISCA1Q9BUE6 129 aa20.54■□□□□ 0.88
PNKP-222ENST00000629088 ADARB2Q9NS39 739 aaKnown RBP20.54■□□□□ 0.88
PNKP-222ENST00000629088 ECE1P42892 770 aa20.53■□□□□ 0.88
PNKP-222ENST00000629088 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
PNKP-222ENST00000629088 TRIM28Q13263 835 aaKnown RBP20.53■□□□□ 0.88
PNKP-222ENST00000629088 DPP8Q6V1X1 898 aaPredicted RBP20.53■□□□□ 0.88
PNKP-222ENST00000629088 GPR101Q96P66 508 aaPredicted RBP20.53■□□□□ 0.88
PNKP-222ENST00000629088 APAF1O14727 1248 aa20.52■□□□□ 0.88
PNKP-222ENST00000629088 MPNDQ8N594 471 aa20.52■□□□□ 0.88
PNKP-222ENST00000629088 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
PNKP-222ENST00000629088 TLL2Q9Y6L7 1015 aa20.52■□□□□ 0.88
PNKP-222ENST00000629088 ABHD8Q96I13 439 aa20.51■□□□□ 0.87
PNKP-222ENST00000629088 LRRC37AA6NMS7 1700 aa20.5■□□□□ 0.87
PNKP-222ENST00000629088 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
PNKP-222ENST00000629088 KIAA2012Q0VF49 1180 aa20.5■□□□□ 0.87
PNKP-222ENST00000629088 SF3B3Q15393 1217 aaKnown RBP20.5■□□□□ 0.87
PNKP-222ENST00000629088 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
PNKP-222ENST00000629088 AOC2O75106 756 aa20.49■□□□□ 0.87
PNKP-222ENST00000629088 RAD17O75943 681 aa20.49■□□□□ 0.87
PNKP-222ENST00000629088 CIAPIN1Q6FI81 312 aa20.49■□□□□ 0.87
PNKP-222ENST00000629088 BEGAINQ9BUH8 593 aa20.49■□□□□ 0.87
PNKP-222ENST00000629088 GLIS2Q9BZE0 524 aaPredicted RBP20.49■□□□□ 0.87
PNKP-222ENST00000629088 CELF2O95319 508 aaKnown RBP20.48■□□□□ 0.87
PNKP-222ENST00000629088 HSP90B1P14625 803 aaKnown RBP20.48■□□□□ 0.87
PNKP-222ENST00000629088 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
PNKP-222ENST00000629088 GOLGA2Q08379 1002 aa20.48■□□□□ 0.87
PNKP-222ENST00000629088 ZNF428Q96B54 188 aa20.48■□□□□ 0.87
PNKP-222ENST00000629088 PGAP2Q9UHJ9 254 aa20.48■□□□□ 0.87
PNKP-222ENST00000629088 TNIP1Q15025 636 aa20.47■□□□□ 0.87
PNKP-222ENST00000629088 SAPCD2Q86UD0 394 aa20.47■□□□□ 0.87
PNKP-222ENST00000629088 FAM89AQ96GI7 184 aa20.47■□□□□ 0.87
PNKP-222ENST00000629088 BCL2L13Q9BXK5 485 aa20.47■□□□□ 0.87
PNKP-222ENST00000629088 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 MAP2K2P36507 400 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 RIC3Q7Z5B4 369 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 TRPM4Q8TD43 1214 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 TSKSQ9UJT2 592 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
PNKP-222ENST00000629088 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
PNKP-222ENST00000629088 YDJCA8MPS7 323 aa20.45■□□□□ 0.86
PNKP-222ENST00000629088 ZBTB38Q8NAP3 1195 aaPredicted RBP20.45■□□□□ 0.86
PNKP-222ENST00000629088 CNOT7Q9UIV1 285 aaKnown RBP20.45■□□□□ 0.86
PNKP-222ENST00000629088 THSD7BQ9C0I4 1608 aa20.45■□□□□ 0.86
PNKP-222ENST00000629088 IRS4O14654 1257 aaPredicted RBP20.44■□□□□ 0.86
PNKP-222ENST00000629088 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
PNKP-222ENST00000629088 CCDC30Q5VVM6 783 aa20.44■□□□□ 0.86
PNKP-222ENST00000629088 ZC3H15Q8WU90 426 aaKnown RBP20.44■□□□□ 0.86
PNKP-222ENST00000629088 ZNF408Q9H9D4 720 aa20.44■□□□□ 0.86
PNKP-222ENST00000629088 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
PNKP-222ENST00000629088 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
PNKP-222ENST00000629088 CELF1Q92879 486 aaKnown RBP20.43■□□□□ 0.86
PNKP-222ENST00000629088 PHAXQ9H814 394 aaKnown RBP20.43■□□□□ 0.86
PNKP-222ENST00000629088 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
PNKP-222ENST00000629088 DDX58O95786 925 aaKnown RBP20.42■□□□□ 0.86
PNKP-222ENST00000629088 CDC37L1Q7L3B6 337 aa20.42■□□□□ 0.86
PNKP-222ENST00000629088 ZBTB12Q9Y330 459 aaPredicted RBP20.42■□□□□ 0.86
PNKP-222ENST00000629088 CCDC85CA6NKD9 419 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 H7C1D1 291 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 WASHC4Q2M389 1173 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 USP48Q86UV5 1035 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 MICALL2Q8IY33 904 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 C8orf58Q8NAV2 365 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 TAF1P21675 1872 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 TRPM7Q96QT4 1865 aa20.41■□□□□ 0.86
PNKP-222ENST00000629088 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
PNKP-222ENST00000629088 RPS8P62241 208 aaKnown RBP20.4■□□□□ 0.86
PNKP-222ENST00000629088 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
PNKP-222ENST00000629088 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
PNKP-222ENST00000629088 METTL22Q9BUU2 404 aaPredicted RBP20.4■□□□□ 0.86
PNKP-222ENST00000629088 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
PNKP-222ENST00000629088 PSMD14O00487 310 aa20.39■□□□□ 0.85
PNKP-222ENST00000629088 BRPF1P55201 1214 aaPredicted RBP20.39■□□□□ 0.85
PNKP-222ENST00000629088 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms