RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 TBC1D2BQ9UPU7 963 aa3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.15□□□□□ -1.91
SPTAN1-216ENST00000629047 DBX1A6NMT0 343 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 WDR64B1ANS9 1081 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 DHX15O43143 795 aaKnown RBP3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 PAPLNO95428 1278 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 VAC14Q08AM6 782 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 GDF6Q6KF10 455 aaPredicted RBP3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 TXNDC11Q6PKC3 985 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 UTP4Q969X6 686 aaKnown RBP3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 SIRT1Q96EB6 747 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 PNMA5Q96PV4 448 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 FRRS1LQ9P0K9 344 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 GPC6Q9Y625 555 aaPredicted RBP3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 NCANO14594 1321 aa3.14□□□□□ -1.91
SPTAN1-216ENST00000629047 CARMIL2Q6F5E8 1435 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 J3QW42 95 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 EIF2AK2P19525 551 aaKnown RBP3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 GTF2IP78347 998 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 CCINQ13939 588 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 MSMPQ1L6U9 139 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 ADAMTSL4Q6UY14 1074 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 ACAD11Q709F0 780 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 DHX32Q7L7V1 743 aaKnown RBP3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 IL22RA1Q8N6P7 574 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 GAS2L2Q8NHY3 880 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 ASIC4Q96FT7 647 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 IFT43Q96FT9 208 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 FAM46AQ96IP4 442 aaKnown RBP3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 CCDC39Q9UFE4 941 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 KIAA1024Q9UPX6 916 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 BCS1LQ9Y276 419 aa3.13□□□□□ -1.91
SPTAN1-216ENST00000629047 DDX3YO15523 660 aaKnown RBP3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 SLC24A1O60721 1099 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 TARSP26639 723 aaKnown RBP3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 PSME1Q06323 249 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 VSIG10Q8N0Z9 540 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 TRPM4Q8TD43 1214 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 NGLY1Q96IV0 654 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 MFSD14AQ96MC6 490 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 CARD10Q9BWT7 1032 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 BCL11AQ9H165 835 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 TRIM33Q9UPN9 1127 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 USP20Q9Y2K6 914 aa3.12□□□□□ -1.91
SPTAN1-216ENST00000629047 PRRG2O14669 202 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 BACH1O14867 736 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 TM4SF5O14894 197 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 SASH3O75995 380 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 PSMA6P60900 246 aaKnown RBP3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 GPLD1P80108 840 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 TMEM132AQ24JP5 1023 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 C1orf53Q5VUE5 145 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 POTEAQ6S8J7 498 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 KIAA1211Q6ZU35 1233 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 CILP2Q8IUL8 1156 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 TP53INP2Q8IXH6 220 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 UBASH3BQ8TF42 649 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 PLD4Q96BZ4 506 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 MYRFLQ96LU7 910 aa3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 PCMTD1Q96MG8 357 aaPredicted RBP3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 ANGEL1Q9UNK9 670 aaKnown RBP3.11□□□□□ -1.91
SPTAN1-216ENST00000629047 C21orf2O43822 256 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 F13BP05160 661 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 PRKCSHP14314 528 aaPredicted RBP3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 CDC25BP30305 580 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 PREPP48147 710 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 EIF4G2P78344 907 aaKnown RBP eCLIP3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 MAP7D1Q3KQU3 841 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 BEND4Q6ZU67 534 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 FAM20CQ8IXL6 584 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 ALDH16A1Q8IZ83 802 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 DEPDC4Q8N2C3 294 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 FBXL6Q8N531 539 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 FOXD4L4Q8WXT5 416 aaPredicted RBP3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 TTC9Q92623 222 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 NSUN5Q96P11 429 aaKnown RBP3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 PCGF6Q9BYE7 350 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 KCNF1Q9H3M0 494 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 PIM2Q9P1W9 311 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 ANKIB1Q9P2G1 1089 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 DMGDHQ9UI17 866 aaKnown RBP3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 JAG2Q9Y219 1238 aa3.1□□□□□ -1.91
SPTAN1-216ENST00000629047 B8ZZF3 427 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 LINC01387J3KSC0 135 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 ADAM11O75078 769 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 LGR5O75473 907 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 MAP3K6O95382 1288 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 RARAP10276 462 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 BMP3P12645 472 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 HIRAP54198 1017 aaPredicted RBP3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 LILRA6Q6PI73 481 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 ZNF574Q6ZN55 896 aaPredicted RBP3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 LCNL1Q6ZST4 164 aa3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 PAK6Q9NQU5 681 aaPredicted RBP3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 ACIN1Q9UKV3 1341 aaKnown RBP3.09□□□□□ -1.91
SPTAN1-216ENST00000629047 PPP1R12BO60237 982 aaPredicted RBP3.08□□□□□ -1.92
SPTAN1-216ENST00000629047 PRNPP04156 253 aa3.08□□□□□ -1.92
SPTAN1-216ENST00000629047 JUNBP17275 347 aaPredicted RBP3.08□□□□□ -1.92
SPTAN1-216ENST00000629047 NCOA4Q13772 614 aa3.08□□□□□ -1.92
SPTAN1-216ENST00000629047 VSIG10LQ86VR7 867 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms