RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 TMEM88BA6NKF7 163 aa16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 DPP8Q6V1X1 898 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 MPNDQ8N594 471 aa16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
SOX2-OT-247ENST00000628347 TAF1P21675 1872 aa16.15■□□□□ 0.18
SOX2-OT-247ENST00000628347 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
SOX2-OT-247ENST00000628347 USP50Q70EL3 339 aaPredicted RBP16.15■□□□□ 0.18
SOX2-OT-247ENST00000628347 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
SOX2-OT-247ENST00000628347 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
SOX2-OT-247ENST00000628347 DUOX1Q9NRD9 1551 aa16.14■□□□□ 0.17
SOX2-OT-247ENST00000628347 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
SOX2-OT-247ENST00000628347 EPS15P42566 896 aa16.14■□□□□ 0.17
SOX2-OT-247ENST00000628347 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
SOX2-OT-247ENST00000628347 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
SOX2-OT-247ENST00000628347 CXCL9Q07325 125 aa16.13■□□□□ 0.17
SOX2-OT-247ENST00000628347 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
SOX2-OT-247ENST00000628347 COL13A1Q5TAT6 717 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-247ENST00000628347 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
SOX2-OT-247ENST00000628347 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 CCDC27Q2M243 656 aa16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 ZBTB38Q8NAP3 1195 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 ADARB2Q9NS39 739 aaKnown RBP16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 GPRC5DQ9NZD1 345 aa16.12■□□□□ 0.17
SOX2-OT-247ENST00000628347 RASSF10A6NK89 507 aa16.11■□□□□ 0.17
SOX2-OT-247ENST00000628347 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
SOX2-OT-247ENST00000628347 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
SOX2-OT-247ENST00000628347 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
SOX2-OT-247ENST00000628347 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
SOX2-OT-247ENST00000628347 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-247ENST00000628347 TNIP1Q15025 636 aa16.1■□□□□ 0.17
SOX2-OT-247ENST00000628347 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
SOX2-OT-247ENST00000628347 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
SOX2-OT-247ENST00000628347 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
SOX2-OT-247ENST00000628347 COL4A1P02462 1669 aa16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 VEGFBP49765 207 aa16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 MYD88Q99836 296 aa16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 TRPM7Q96QT4 1865 aa16.09■□□□□ 0.17
SOX2-OT-247ENST00000628347 YDJCA8MPS7 323 aa16.08■□□□□ 0.16
SOX2-OT-247ENST00000628347 RPS8P62241 208 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-247ENST00000628347 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-247ENST00000628347 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-247ENST00000628347 PGAP2Q9UHJ9 254 aa16.08■□□□□ 0.16
SOX2-OT-247ENST00000628347 RAD17O75943 681 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 DEFB115Q30KQ5 88 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 TSPYL6Q8N831 410 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 CWC25Q9NXE8 425 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 IL16Q14005 1332 aa16.07■□□□□ 0.16
SOX2-OT-247ENST00000628347 PDE8AO60658 829 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 ZEB1P37275 1124 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 GPSM2P81274 684 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 TNS4Q8IZW8 715 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 EYA3Q99504 573 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 BCL2L13Q9BXK5 485 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SOX2-OT-247ENST00000628347 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
SOX2-OT-247ENST00000628347 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
SOX2-OT-247ENST00000628347 DPF2Q92785 391 aa16.05■□□□□ 0.16
SOX2-OT-247ENST00000628347 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
SOX2-OT-247ENST00000628347 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 FOXN1O15353 648 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 SEC31BQ9NQW1 1179 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 ABT1Q9ULW3 272 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
SOX2-OT-247ENST00000628347 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 TRAF5O00463 557 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 PSMD14O00487 310 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 CST9Q5W186 159 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 TLL2Q9Y6L7 1015 aa16.03■□□□□ 0.16
SOX2-OT-247ENST00000628347 PI4KAP2A4QPH2 592 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 H7C1D1 291 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 ECE2O60344 883 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 IGKV5-2P06315 115 aa16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-247ENST00000628347 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms