RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ATP6V0A2Q9Y487 856 aa21.3■■□□□ 1
UBE3D-208ENST00000626828 F6X3S4 739 aa21.29■■□□□ 1
UBE3D-208ENST00000626828 ZNF526Q8TF50 670 aaPredicted RBP21.29■■□□□ 1
UBE3D-208ENST00000626828 PSMD1Q99460 953 aa21.29■■□□□ 1
UBE3D-208ENST00000626828 BEND3Q5T5X7 828 aa21.28■■□□□ 1
UBE3D-208ENST00000626828 CCDC152Q4G0S7 254 aa21.27■■□□□ 1
UBE3D-208ENST00000626828 DPY19L2Q6NUT2 758 aa21.27■■□□□ 1
UBE3D-208ENST00000626828 LAMB2P55268 1798 aa21.27■■□□□ 1
UBE3D-208ENST00000626828 RPS8P62241 208 aaKnown RBP21.26■□□□□ 0.99
UBE3D-208ENST00000626828 UBE3BQ7Z3V4 1068 aa21.26■□□□□ 0.99
UBE3D-208ENST00000626828 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
UBE3D-208ENST00000626828 PTPRCP08575 1304 aa21.26■□□□□ 0.99
UBE3D-208ENST00000626828 KDM2BQ8NHM5 1336 aa21.26■□□□□ 0.99
UBE3D-208ENST00000626828 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
UBE3D-208ENST00000626828 ZNF277Q9NRM2 450 aaPredicted RBP21.25■□□□□ 0.99
UBE3D-208ENST00000626828 DICER1Q9UPY3 1922 aaKnown RBP21.25■□□□□ 0.99
UBE3D-208ENST00000626828 GLTPD2A6NH11 291 aa21.24■□□□□ 0.99
UBE3D-208ENST00000626828 ALDH1L1O75891 902 aa21.24■□□□□ 0.99
UBE3D-208ENST00000626828 MPNDQ8N594 471 aa21.24■□□□□ 0.99
UBE3D-208ENST00000626828 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
UBE3D-208ENST00000626828 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
UBE3D-208ENST00000626828 VPS33BQ9H267 617 aa21.24■□□□□ 0.99
UBE3D-208ENST00000626828 IARSP41252 1262 aaKnown RBP21.23■□□□□ 0.99
UBE3D-208ENST00000626828 SUPT20HQ8NEM7 779 aa21.23■□□□□ 0.99
UBE3D-208ENST00000626828 TTLL11Q8NHH1 800 aa21.23■□□□□ 0.99
UBE3D-208ENST00000626828 PLA2G12BQ9BX93 195 aa21.23■□□□□ 0.99
UBE3D-208ENST00000626828 SMC4Q9NTJ3 1288 aa21.23■□□□□ 0.99
UBE3D-208ENST00000626828 TAF1P21675 1872 aa21.23■□□□□ 0.99
UBE3D-208ENST00000626828 CASP7P55210 303 aa21.22■□□□□ 0.99
UBE3D-208ENST00000626828 CTSWP56202 376 aa21.22■□□□□ 0.99
UBE3D-208ENST00000626828 BCL2L13Q9BXK5 485 aa21.22■□□□□ 0.99
UBE3D-208ENST00000626828 SEC31BQ9NQW1 1179 aa21.22■□□□□ 0.99
UBE3D-208ENST00000626828 BRPF1P55201 1214 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-208ENST00000626828 DPP8Q6V1X1 898 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-208ENST00000626828 JDP2Q8WYK2 163 aa21.21■□□□□ 0.99
UBE3D-208ENST00000626828 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-208ENST00000626828 RTFDC1Q9BY42 306 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-208ENST00000626828 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
UBE3D-208ENST00000626828 SNED1Q8TER0 1413 aa21.21■□□□□ 0.99
UBE3D-208ENST00000626828 RARSP54136 660 aaKnown RBP21.2■□□□□ 0.98
UBE3D-208ENST00000626828 GRM8O00222 908 aa21.19■□□□□ 0.98
UBE3D-208ENST00000626828 CSF1RP07333 972 aa21.19■□□□□ 0.98
UBE3D-208ENST00000626828 ANKRD18AQ8IVF6 992 aa21.19■□□□□ 0.98
UBE3D-208ENST00000626828 CDC5LQ99459 802 aaKnown RBP21.19■□□□□ 0.98
UBE3D-208ENST00000626828 RRAGCQ9HB90 399 aa21.19■□□□□ 0.98
UBE3D-208ENST00000626828 NMRK2Q9NPI5 230 aa21.19■□□□□ 0.98
UBE3D-208ENST00000626828 NSFL1CQ9UNZ2 370 aaKnown RBP21.19■□□□□ 0.98
UBE3D-208ENST00000626828 KIF3CO14782 793 aa21.18■□□□□ 0.98
UBE3D-208ENST00000626828 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
UBE3D-208ENST00000626828 NOB1Q9ULX3 412 aaKnown RBP21.18■□□□□ 0.98
UBE3D-208ENST00000626828 ZBED9Q6R2W3 1325 aa21.18■□□□□ 0.98
UBE3D-208ENST00000626828 SLC51AQ86UW1 340 aa21.17■□□□□ 0.98
UBE3D-208ENST00000626828 GREM2Q9H772 168 aa21.17■□□□□ 0.98
UBE3D-208ENST00000626828 MYH3P11055 1940 aa21.16■□□□□ 0.98
UBE3D-208ENST00000626828 RTL9Q8NET4 1388 aa21.16■□□□□ 0.98
UBE3D-208ENST00000626828 FZD9O00144 591 aa21.16■□□□□ 0.98
UBE3D-208ENST00000626828 PPIP5K2O43314 1243 aa21.16■□□□□ 0.98
UBE3D-208ENST00000626828 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
UBE3D-208ENST00000626828 C1QTNF8P60827 252 aa21.16■□□□□ 0.98
UBE3D-208ENST00000626828 ARHGAP45Q92619 1136 aa21.15■□□□□ 0.98
UBE3D-208ENST00000626828 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
UBE3D-208ENST00000626828 BSDC1Q9NW68 430 aaPredicted RBP21.15■□□□□ 0.98
UBE3D-208ENST00000626828 DDNO94850 711 aaPredicted RBP21.14■□□□□ 0.97
UBE3D-208ENST00000626828 EIF6P56537 245 aaKnown RBP21.14■□□□□ 0.97
UBE3D-208ENST00000626828 GPSM2P81274 684 aa21.14■□□□□ 0.97
UBE3D-208ENST00000626828 FOXO4P98177 505 aa21.14■□□□□ 0.97
UBE3D-208ENST00000626828 NIM1KQ8IY84 436 aa21.14■□□□□ 0.97
UBE3D-208ENST00000626828 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
UBE3D-208ENST00000626828 PODXL2Q9NZ53 605 aa21.14■□□□□ 0.97
UBE3D-208ENST00000626828 C6orf229H3BNL8 230 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 IPO8O15397 1037 aaKnown RBP21.13■□□□□ 0.97
UBE3D-208ENST00000626828 TOMM70O94826 608 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 ITGA6P23229 1130 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 IGHMBP2P38935 993 aaKnown RBP21.13■□□□□ 0.97
UBE3D-208ENST00000626828 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 AOC3Q16853 763 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 EYA3Q99504 573 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 ANKIB1Q9P2G1 1089 aa21.13■□□□□ 0.97
UBE3D-208ENST00000626828 UTYO14607 1347 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 ANKRD18BA2A2Z9 1011 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 CCT4P50991 539 aaKnown RBP21.12■□□□□ 0.97
UBE3D-208ENST00000626828 WASHC4Q2M389 1173 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 POLLQ9UGP5 575 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 TIAM2Q8IVF5 1701 aa21.12■□□□□ 0.97
UBE3D-208ENST00000626828 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
UBE3D-208ENST00000626828 NBPF7P0C2Y1 421 aaPredicted RBP21.11■□□□□ 0.97
UBE3D-208ENST00000626828 IFIT5Q13325 482 aaKnown RBP21.11■□□□□ 0.97
UBE3D-208ENST00000626828 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
UBE3D-208ENST00000626828 MPHOSPH8Q99549 860 aa21.11■□□□□ 0.97
UBE3D-208ENST00000626828 ZNRF3Q9ULT6 936 aa21.11■□□□□ 0.97
UBE3D-208ENST00000626828 POTECB2RU33 542 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 FAM161AQ3B820 660 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 EPHA10Q5JZY3 1008 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 GPC2Q8N158 579 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 ZC3H12CQ9C0D7 883 aaKnown RBP21.1■□□□□ 0.97
UBE3D-208ENST00000626828 USP44Q9H0E7 712 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 GGA1Q9UJY5 639 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 MINPP1Q9UNW1 487 aa21.1■□□□□ 0.97
UBE3D-208ENST00000626828 CHMP3Q9Y3E7 222 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms