RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SLC20A2Q08357 652 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 NCBP1Q09161 790 aaKnown RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 RRS1Q15050 365 aaKnown RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 FOXD4L5Q5VV16 416 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 FAM200AQ8TCP9 573 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 FOXD4L4Q8WXT5 416 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 PXDNQ92626 1479 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 ZSCAN31Q96LW9 406 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 STK17AQ9UEE5 414 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 PALD1Q9ULE6 856 aa4.97□□□□□ -1.61
PTP4A1-205ENST00000626021 AFDNP55196 1824 aaKnown RBP4.96□□□□□ -1.61
PTP4A1-205ENST00000626021 ELP1O95163 1332 aa4.96□□□□□ -1.61
PTP4A1-205ENST00000626021 NEMFO60524 1076 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 CAVIN2O95810 425 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 GNAI2P04899 355 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 SYT1P21579 422 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 CDC25BP30305 580 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 RNF20Q5VTR2 975 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 RBM43Q6ZSC3 357 aaKnown RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 MEIS3Q99687 375 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 ARID3AQ99856 593 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 THUMPD2Q9BTF0 503 aaKnown RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 LRRCC1Q9C099 1032 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 KCND1Q9NSA2 647 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 TMEM51Q9NW97 253 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 LIMCH1Q9UPQ0 1083 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 CNPY2Q9Y2B0 182 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 MRC1P22897 1456 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 SOS1Q07889 1333 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 MYH15Q9Y2K3 1946 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 GNAI3P08754 354 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 HMOX1P09601 288 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 FBLN1P23142 703 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 TERF2Q15554 542 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 SLFNL1Q499Z3 407 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 ZNF771Q7L3S4 317 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 C17orf53Q8N3J3 647 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 RTF1Q92541 710 aaKnown RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 KCNB2Q92953 911 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 TM6SF1Q9BZW5 370 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 GDPD2Q9HCC8 539 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 ANO2Q9NQ90 1003 aa4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 SH2B1Q9NRF2 756 aaPredicted RBP4.96□□□□□ -1.62
PTP4A1-205ENST00000626021 COL22A1Q8NFW1 1626 aaPredicted RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 RAD50Q92878 1312 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 ARHGAP33O14559 1287 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 RAB11FIP3O75154 756 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 TNNT1P13805 278 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 GTF2E1P29083 439 aaPredicted RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 GIMAP6Q6P9H5 292 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 PLA2G4DQ86XP0 818 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 NGDNQ8NEJ9 315 aaKnown RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 ZNF397Q8NF99 534 aaPredicted RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 TDRD7Q8NHU6 1098 aaKnown RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 CALCOCO1Q9P1Z2 691 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 PHF8Q9UPP1 1060 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 SMC3Q9UQE7 1217 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 ARFGEF2Q9Y6D5 1785 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 NUP188Q5SRE5 1749 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 KIF2AO00139 706 aaPredicted RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 SGSM2O43147 1006 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 TUBB4AP04350 444 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 RBM6P78332 1123 aaKnown RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 MAP3K11Q16584 847 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 KRT222Q8N1A0 295 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 KIF18AQ8NI77 898 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 DDX19AQ9NUU7 478 aaKnown RBP4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 MTMR6Q9Y217 621 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 SNX14Q9Y5W7 946 aa4.95□□□□□ -1.62
PTP4A1-205ENST00000626021 TRIM6-TRIM34B2RNG4 842 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 NRG2O14511 850 aaPredicted RBP4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 HTATSF1O43719 755 aaKnown RBP4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 HOXC9P31274 260 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 ZNF75DP51815 510 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 HSP90AB2PQ58FF8 381 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 VPS53Q5VIR6 699 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 SARM1Q6SZW1 724 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 CCDC186Q7Z3E2 898 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 CCDC112Q8NEF3 446 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 FBXO22Q8NEZ5 403 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 ERO1AQ96HE7 468 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 LSG1Q9H089 658 aaKnown RBP4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 TSPYL1Q9H0U9 437 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 NUP62CLQ9H1M0 184 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 ALDH8A1Q9H2A2 487 aaPredicted RBP4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 MRVI1Q9Y6F6 885 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 MAP3K5Q99683 1374 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 ITGB4P16144 1822 aa4.94□□□□□ -1.62
PTP4A1-205ENST00000626021 TOGARAM1Q9Y4F4 1720 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 FAM177BA6PVY3 158 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 GFRA3O60609 400 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 PTGS1P23219 599 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 AK2P54819 239 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 KRT85P78386 507 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 TYRO3Q06418 890 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 SULT6B1Q6IMI4 303 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 ZSCAN25Q6NSZ9 544 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 MPNDQ8N594 471 aa4.93□□□□□ -1.62
PTP4A1-205ENST00000626021 RILPL2Q969X0 211 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms