RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 ISCA1Q9BUE6 129 aa24.84■■□□□ 1.57
ATG4B-226ENST00000625810 RIC3Q7Z5B4 369 aa24.83■■□□□ 1.57
ATG4B-226ENST00000625810 VPS33BQ9H267 617 aa24.83■■□□□ 1.57
ATG4B-226ENST00000625810 DDX60Q8IY21 1712 aaKnown RBP24.83■■□□□ 1.57
ATG4B-226ENST00000625810 EPS15P42566 896 aa24.82■■□□□ 1.56
ATG4B-226ENST00000625810 GOLGA2Q08379 1002 aa24.82■■□□□ 1.56
ATG4B-226ENST00000625810 GRAPQ13588 217 aa24.82■■□□□ 1.56
ATG4B-226ENST00000625810 DPP8Q6V1X1 898 aaPredicted RBP24.82■■□□□ 1.56
ATG4B-226ENST00000625810 MPNDQ8N594 471 aa24.82■■□□□ 1.56
ATG4B-226ENST00000625810 GRAPLQ8TC17 118 aaPredicted RBP24.82■■□□□ 1.56
ATG4B-226ENST00000625810 FAM89AQ96GI7 184 aa24.82■■□□□ 1.56
ATG4B-226ENST00000625810 CCDC184Q52MB2 194 aa24.81■■□□□ 1.56
ATG4B-226ENST00000625810 CHMP4AQ9BY43 222 aa24.8■■□□□ 1.56
ATG4B-226ENST00000625810 PHAXQ9H814 394 aaKnown RBP24.8■■□□□ 1.56
ATG4B-226ENST00000625810 DUOX1Q9NRD9 1551 aa24.8■■□□□ 1.56
ATG4B-226ENST00000625810 TAF1P21675 1872 aa24.79■■□□□ 1.56
ATG4B-226ENST00000625810 LRRC37AA6NMS7 1700 aa24.79■■□□□ 1.56
ATG4B-226ENST00000625810 RTL5Q5HYW3 569 aaPredicted RBP24.79■■□□□ 1.56
ATG4B-226ENST00000625810 TNS4Q8IZW8 715 aa24.79■■□□□ 1.56
ATG4B-226ENST00000625810 C8orf58Q8NAV2 365 aa24.79■■□□□ 1.56
ATG4B-226ENST00000625810 ZNRF3Q9ULT6 936 aa24.79■■□□□ 1.56
ATG4B-226ENST00000625810 VEGFBP49765 207 aa24.78■■□□□ 1.56
ATG4B-226ENST00000625810 CXCL9Q07325 125 aa24.78■■□□□ 1.56
ATG4B-226ENST00000625810 KIAA2012Q0VF49 1180 aa24.78■■□□□ 1.56
ATG4B-226ENST00000625810 TRIM28Q13263 835 aaKnown RBP24.78■■□□□ 1.56
ATG4B-226ENST00000625810 TMC4Q7Z404 712 aa24.78■■□□□ 1.56
ATG4B-226ENST00000625810 CCDC30Q5VVM6 783 aa24.77■■□□□ 1.56
ATG4B-226ENST00000625810 USP50Q70EL3 339 aaPredicted RBP24.77■■□□□ 1.56
ATG4B-226ENST00000625810 GPRC5DQ9NZD1 345 aa24.77■■□□□ 1.56
ATG4B-226ENST00000625810 COL4A1P02462 1669 aa24.76■■□□□ 1.55
ATG4B-226ENST00000625810 IRS4O14654 1257 aaPredicted RBP24.76■■□□□ 1.55
ATG4B-226ENST00000625810 SF3B3Q15393 1217 aaKnown RBP24.76■■□□□ 1.55
ATG4B-226ENST00000625810 RASSF10A6NK89 507 aa24.75■■□□□ 1.55
ATG4B-226ENST00000625810 MYD88Q99836 296 aa24.75■■□□□ 1.55
ATG4B-226ENST00000625810 DDX58O95786 925 aaKnown RBP24.74■■□□□ 1.55
ATG4B-226ENST00000625810 ADARB2Q9NS39 739 aaKnown RBP24.74■■□□□ 1.55
ATG4B-226ENST00000625810 ANP32CO43423 234 aa24.73■■□□□ 1.55
ATG4B-226ENST00000625810 HSP90B1P14625 803 aaKnown RBP24.73■■□□□ 1.55
ATG4B-226ENST00000625810 GMPSP49915 693 aaPredicted RBP24.73■■□□□ 1.55
ATG4B-226ENST00000625810 FMR1Q06787 632 aaKnown RBP eCLIP24.73■■□□□ 1.55
ATG4B-226ENST00000625810 ZBTB38Q8NAP3 1195 aaPredicted RBP24.73■■□□□ 1.55
ATG4B-226ENST00000625810 CELF1Q92879 486 aaKnown RBP24.73■■□□□ 1.55
ATG4B-226ENST00000625810 MRS2Q9HD23 443 aa24.73■■□□□ 1.55
ATG4B-226ENST00000625810 ZNF316A6NFI3 1004 aaPredicted RBP24.72■■□□□ 1.55
ATG4B-226ENST00000625810 FOXN1O15353 648 aa24.72■■□□□ 1.55
ATG4B-226ENST00000625810 CCDC27Q2M243 656 aa24.72■■□□□ 1.55
ATG4B-226ENST00000625810 CIAPIN1Q6FI81 312 aa24.72■■□□□ 1.55
ATG4B-226ENST00000625810 TSPYL6Q8N831 410 aa24.72■■□□□ 1.55
ATG4B-226ENST00000625810 TSR2Q969E8 191 aaKnown RBP24.72■■□□□ 1.55
ATG4B-226ENST00000625810 YDJCA8MPS7 323 aa24.71■■□□□ 1.55
ATG4B-226ENST00000625810 RAD17O75943 681 aa24.71■■□□□ 1.55
ATG4B-226ENST00000625810 DEFB115Q30KQ5 88 aa24.71■■□□□ 1.55
ATG4B-226ENST00000625810 WWC1Q8IX03 1113 aa24.71■■□□□ 1.55
ATG4B-226ENST00000625810 CCDC191Q8NCU4 936 aa24.71■■□□□ 1.55
ATG4B-226ENST00000625810 ABT1Q9ULW3 272 aaKnown RBP24.71■■□□□ 1.55
ATG4B-226ENST00000625810 NSFL1CQ9UNZ2 370 aaKnown RBP24.71■■□□□ 1.55
ATG4B-226ENST00000625810 CDHR2Q9BYE9 1310 aa24.7■■□□□ 1.54
ATG4B-226ENST00000625810 TRAF5O00463 557 aa24.7■■□□□ 1.54
ATG4B-226ENST00000625810 METTL22Q9BUU2 404 aaPredicted RBP24.7■■□□□ 1.54
ATG4B-226ENST00000625810 STK31Q9BXU1 1019 aa24.7■■□□□ 1.54
ATG4B-226ENST00000625810 TNIP1Q15025 636 aa24.69■■□□□ 1.54
ATG4B-226ENST00000625810 BCL2L13Q9BXK5 485 aa24.69■■□□□ 1.54
ATG4B-226ENST00000625810 CWC25Q9NXE8 425 aaPredicted RBP24.69■■□□□ 1.54
ATG4B-226ENST00000625810 C6orf229H3BNL8 230 aa24.68■■□□□ 1.54
ATG4B-226ENST00000625810 CAPN15O75808 1086 aa24.68■■□□□ 1.54
ATG4B-226ENST00000625810 RPS8P62241 208 aaKnown RBP24.68■■□□□ 1.54
ATG4B-226ENST00000625810 WASHC4Q2M389 1173 aa24.68■■□□□ 1.54
ATG4B-226ENST00000625810 MAP3K2Q9Y2U5 619 aa24.68■■□□□ 1.54
ATG4B-226ENST00000625810 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
ATG4B-226ENST00000625810 PCCAP05165 728 aaPredicted RBP24.67■■□□□ 1.54
ATG4B-226ENST00000625810 GPSM2P81274 684 aa24.67■■□□□ 1.54
ATG4B-226ENST00000625810 CST9Q5W186 159 aa24.67■■□□□ 1.54
ATG4B-226ENST00000625810 JARID2Q92833 1246 aaPredicted RBP24.67■■□□□ 1.54
ATG4B-226ENST00000625810 AIDAQ96BJ3 306 aa24.67■■□□□ 1.54
ATG4B-226ENST00000625810 WBP1LQ9NX94 342 aa24.67■■□□□ 1.54
ATG4B-226ENST00000625810 TRPM7Q96QT4 1865 aa24.66■■□□□ 1.54
ATG4B-226ENST00000625810 THSD7BQ9C0I4 1608 aa24.66■■□□□ 1.54
ATG4B-226ENST00000625810 TWISTNBQ3B726 338 aaPredicted RBP24.66■■□□□ 1.54
ATG4B-226ENST00000625810 POLLQ9UGP5 575 aa24.66■■□□□ 1.54
ATG4B-226ENST00000625810 SHTN1A0MZ66 631 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 RIMBP2O15034 1052 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 PDE8AO60658 829 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 CCDC152Q4G0S7 254 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 KSR2Q6VAB6 950 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 TRPM4Q8TD43 1214 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 EYA3Q99504 573 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 PGAP2Q9UHJ9 254 aa24.65■■□□□ 1.54
ATG4B-226ENST00000625810 IL16Q14005 1332 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 PI4KAP2A4QPH2 592 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 CTCFP49711 727 aaPredicted RBP24.64■■□□□ 1.54
ATG4B-226ENST00000625810 HIRAP54198 1017 aaPredicted RBP24.64■■□□□ 1.54
ATG4B-226ENST00000625810 NEXNQ0ZGT2 675 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 PI4KAP1Q8N8J0 262 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 DBNDD1Q9H9R9 158 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 PRDM10Q9NQV6 1147 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 SEC31BQ9NQW1 1179 aa24.64■■□□□ 1.54
ATG4B-226ENST00000625810 SALL2Q9Y467 1007 aaPredicted RBP24.64■■□□□ 1.54
ATG4B-226ENST00000625810 NCBP3Q53F19 620 aaKnown RBP24.63■■□□□ 1.53
ATG4B-226ENST00000625810 CCDC85AQ96PX6 553 aaPredicted RBP24.63■■□□□ 1.53
ATG4B-226ENST00000625810 GLIS2Q9BZE0 524 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms