RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
LINC01560-202ENST00000624822 C2CD5Q86YS7 1000 aa12.19□□□□□ -0.46
LINC01560-202ENST00000624822 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
LINC01560-202ENST00000624822 UTP14AQ9BVJ6 771 aaKnown RBP12.19□□□□□ -0.46
LINC01560-202ENST00000624822 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
LINC01560-202ENST00000624822 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
LINC01560-202ENST00000624822 ADCY9O60503 1353 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 IBTKQ9P2D0 1353 aaPredicted RBP12.18□□□□□ -0.46
LINC01560-202ENST00000624822 NTSR2O95665 410 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 CT47B1P0C2W7 299 aaPredicted RBP12.18□□□□□ -0.46
LINC01560-202ENST00000624822 GSE1Q14687 1217 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 NLRP10Q86W26 655 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 METTL22Q9BUU2 404 aaPredicted RBP12.18□□□□□ -0.46
LINC01560-202ENST00000624822 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 PIM2Q9P1W9 311 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
LINC01560-202ENST00000624822 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
LINC01560-202ENST00000624822 SSH1Q8WYL5 1049 aa12.17□□□□□ -0.46
LINC01560-202ENST00000624822 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC01560-202ENST00000624822 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
LINC01560-202ENST00000624822 TAF1P21675 1872 aa12.17□□□□□ -0.46
LINC01560-202ENST00000624822 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
LINC01560-202ENST00000624822 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
LINC01560-202ENST00000624822 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 DNAAF4Q8WXU2 420 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
LINC01560-202ENST00000624822 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 F6X3S4 739 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01560-202ENST00000624822 KCNA3P22001 575 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 CWF19L2Q2TBE0 894 aaKnown RBP12.15□□□□□ -0.46
LINC01560-202ENST00000624822 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
LINC01560-202ENST00000624822 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
LINC01560-202ENST00000624822 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 FAM89AQ96GI7 184 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 CWC25Q9NXE8 425 aaPredicted RBP12.15□□□□□ -0.46
LINC01560-202ENST00000624822 SPEF2Q9C093 1822 aa12.15□□□□□ -0.46
LINC01560-202ENST00000624822 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 GRIN3BO60391 1043 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
LINC01560-202ENST00000624822 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
LINC01560-202ENST00000624822 MASTLQ96GX5 879 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
LINC01560-202ENST00000624822 PTPRCP08575 1304 aa12.13□□□□□ -0.47
LINC01560-202ENST00000624822 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
LINC01560-202ENST00000624822 SRGNP10124 158 aa12.13□□□□□ -0.47
LINC01560-202ENST00000624822 NPR1P16066 1061 aa12.13□□□□□ -0.47
LINC01560-202ENST00000624822 RARSP54136 660 aaKnown RBP12.13□□□□□ -0.47
LINC01560-202ENST00000624822 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
LINC01560-202ENST00000624822 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
LINC01560-202ENST00000624822 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 IRS4O14654 1257 aaPredicted RBP12.12□□□□□ -0.47
LINC01560-202ENST00000624822 STYK1Q6J9G0 422 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
LINC01560-202ENST00000624822 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 SBF1O95248 1867 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 FER1L6Q2WGJ9 1857 aa12.12□□□□□ -0.47
LINC01560-202ENST00000624822 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
LINC01560-202ENST00000624822 PCCAP05165 728 aaPredicted RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 HSP90B1P14625 803 aaKnown RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 ALDH1B1P30837 517 aa12.11□□□□□ -0.47
LINC01560-202ENST00000624822 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 FRAT1Q92837 279 aaPredicted RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 RBM17Q96I25 401 aaKnown RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 SRCIN1Q9C0H9 1055 aa12.11□□□□□ -0.47
LINC01560-202ENST00000624822 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
LINC01560-202ENST00000624822 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
LINC01560-202ENST00000624822 SLC10A5Q5PT55 438 aa12.1□□□□□ -0.47
LINC01560-202ENST00000624822 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
LINC01560-202ENST00000624822 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
LINC01560-202ENST00000624822 ARHGAP27Q6ZUM4 889 aa12.1□□□□□ -0.47
LINC01560-202ENST00000624822 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
LINC01560-202ENST00000624822 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
LINC01560-202ENST00000624822 C21orf2O43822 256 aa12.09□□□□□ -0.47
LINC01560-202ENST00000624822 BCAR3O75815 825 aa12.09□□□□□ -0.47
LINC01560-202ENST00000624822 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
LINC01560-202ENST00000624822 GCKRQ14397 625 aa12.09□□□□□ -0.47
LINC01560-202ENST00000624822 CRY2Q49AN0 593 aa12.09□□□□□ -0.47
LINC01560-202ENST00000624822 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
LINC01560-202ENST00000624822 API5Q9BZZ5 524 aaKnown RBP12.09□□□□□ -0.47
LINC01560-202ENST00000624822 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
LINC01560-202ENST00000624822 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
LINC01560-202ENST00000624822 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
LINC01560-202ENST00000624822 PDE8AO60658 829 aa12.08□□□□□ -0.48
LINC01560-202ENST00000624822 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
LINC01560-202ENST00000624822 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
LINC01560-202ENST00000624822 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
LINC01560-202ENST00000624822 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
LINC01560-202ENST00000624822 ABCC4O15439 1325 aa12.08□□□□□ -0.48
LINC01560-202ENST00000624822 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms