RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 MPNDQ8N594 471 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 COL4A1P02462 1669 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 SCNN1DP51172 638 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
USH1C-211ENST00000624811 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 CNTROBQ8N137 903 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
USH1C-211ENST00000624811 TMEM88BA6NKF7 163 aa17.77■□□□□ 0.44
USH1C-211ENST00000624811 GOLGA2Q08379 1002 aa17.77■□□□□ 0.44
USH1C-211ENST00000624811 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
USH1C-211ENST00000624811 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.44
USH1C-211ENST00000624811 CXCL9Q07325 125 aa17.76■□□□□ 0.43
USH1C-211ENST00000624811 CELF1Q92879 486 aaKnown RBP17.76■□□□□ 0.43
USH1C-211ENST00000624811 MYD88Q99836 296 aa17.76■□□□□ 0.43
USH1C-211ENST00000624811 ZNRF3Q9ULT6 936 aa17.76■□□□□ 0.43
USH1C-211ENST00000624811 CNTNAP1P78357 1384 aa17.76■□□□□ 0.43
USH1C-211ENST00000624811 IRS4O14654 1257 aaPredicted RBP17.75■□□□□ 0.43
USH1C-211ENST00000624811 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
USH1C-211ENST00000624811 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
USH1C-211ENST00000624811 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
USH1C-211ENST00000624811 TRPM7Q96QT4 1865 aa17.74■□□□□ 0.43
USH1C-211ENST00000624811 RAD17O75943 681 aa17.74■□□□□ 0.43
USH1C-211ENST00000624811 GMPSP49915 693 aaPredicted RBP17.74■□□□□ 0.43
USH1C-211ENST00000624811 KIAA2012Q0VF49 1180 aa17.74■□□□□ 0.43
USH1C-211ENST00000624811 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
USH1C-211ENST00000624811 VPS33BQ9H267 617 aa17.74■□□□□ 0.43
USH1C-211ENST00000624811 RIMBP2O15034 1052 aa17.73■□□□□ 0.43
USH1C-211ENST00000624811 VEGFBP49765 207 aa17.73■□□□□ 0.43
USH1C-211ENST00000624811 SF3B3Q15393 1217 aaKnown RBP17.73■□□□□ 0.43
USH1C-211ENST00000624811 CIAPIN1Q6FI81 312 aa17.73■□□□□ 0.43
USH1C-211ENST00000624811 GPRC5DQ9NZD1 345 aa17.73■□□□□ 0.43
USH1C-211ENST00000624811 NSFL1CQ9UNZ2 370 aaKnown RBP17.73■□□□□ 0.43
USH1C-211ENST00000624811 GPSM2P81274 684 aa17.72■□□□□ 0.43
USH1C-211ENST00000624811 USP50Q70EL3 339 aaPredicted RBP17.72■□□□□ 0.43
USH1C-211ENST00000624811 TMC4Q7Z404 712 aa17.72■□□□□ 0.43
USH1C-211ENST00000624811 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
USH1C-211ENST00000624811 BCL2L13Q9BXK5 485 aa17.72■□□□□ 0.43
USH1C-211ENST00000624811 ABT1Q9ULW3 272 aaKnown RBP17.72■□□□□ 0.43
USH1C-211ENST00000624811 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 YDJCA8MPS7 323 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 C6orf229H3BNL8 230 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 TRAF5O00463 557 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 CAPN15O75808 1086 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
USH1C-211ENST00000624811 CCDC30Q5VVM6 783 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 TNS4Q8IZW8 715 aa17.71■□□□□ 0.43
USH1C-211ENST00000624811 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
USH1C-211ENST00000624811 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.43
USH1C-211ENST00000624811 DBNDD1Q9H9R9 158 aa17.7■□□□□ 0.42
USH1C-211ENST00000624811 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
USH1C-211ENST00000624811 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
USH1C-211ENST00000624811 SHTN1A0MZ66 631 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 TNIP1Q15025 636 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 DEFB115Q30KQ5 88 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
USH1C-211ENST00000624811 POLLQ9UGP5 575 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
USH1C-211ENST00000624811 DDX58O95786 925 aaKnown RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 GRM1Q13255 1194 aa17.68■□□□□ 0.42
USH1C-211ENST00000624811 DOK7Q18PE1 504 aa17.68■□□□□ 0.42
USH1C-211ENST00000624811 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 CCDC191Q8NCU4 936 aa17.68■□□□□ 0.42
USH1C-211ENST00000624811 METTL22Q9BUU2 404 aaPredicted RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 MRS2Q9HD23 443 aa17.68■□□□□ 0.42
USH1C-211ENST00000624811 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 SALL2Q9Y467 1007 aaPredicted RBP17.68■□□□□ 0.42
USH1C-211ENST00000624811 MYH3P11055 1940 aa17.68■□□□□ 0.42
USH1C-211ENST00000624811 FOXN1O15353 648 aa17.67■□□□□ 0.42
USH1C-211ENST00000624811 WWC1Q8IX03 1113 aa17.67■□□□□ 0.42
USH1C-211ENST00000624811 SCN9AQ15858 1988 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 RASSF10A6NK89 507 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 PSMD14O00487 310 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 TBC1D16Q8TBP0 767 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 TRPM4Q8TD43 1214 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
USH1C-211ENST00000624811 GLIS2Q9BZE0 524 aaPredicted RBP17.66■□□□□ 0.42
USH1C-211ENST00000624811 CNOT7Q9UIV1 285 aaKnown RBP17.66■□□□□ 0.42
USH1C-211ENST00000624811 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 ECE2O60344 883 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 PDE8AO60658 829 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 HIRAP54198 1017 aaPredicted RBP17.65■□□□□ 0.42
USH1C-211ENST00000624811 TWISTNBQ3B726 338 aaPredicted RBP17.65■□□□□ 0.42
USH1C-211ENST00000624811 CCDC152Q4G0S7 254 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 CST9Q5W186 159 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 G2E3Q7L622 706 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 MICALL2Q8IY33 904 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 EYA3Q99504 573 aa17.65■□□□□ 0.42
USH1C-211ENST00000624811 KCNQ5Q9NR82 932 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms