RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 FAM89AQ96GI7 184 aa8.63□□□□□ -1.03
CBWD3-219ENST00000622817 AK7Q96M32 723 aa8.63□□□□□ -1.03
CBWD3-219ENST00000622817 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
CBWD3-219ENST00000622817 TRMT112Q9UI30 125 aaKnown RBP8.63□□□□□ -1.03
CBWD3-219ENST00000622817 ZPR1O75312 459 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 C8orf34Q49A92 452 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 BMP2KLQ5H9B9 411 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 UTP14AQ9BVJ6 771 aaKnown RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 TAF1LQ8IZX4 1826 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 PLSCR1O15162 318 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 OTUD7AQ8TE49 926 aaPredicted RBP8.62□□□□□ -1.03
CBWD3-219ENST00000622817 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
CBWD3-219ENST00000622817 C4BP0C0L5 1744 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 SH3TC1Q8TE82 1336 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 IRS4O14654 1257 aaPredicted RBP8.61□□□□□ -1.03
CBWD3-219ENST00000622817 APBA3O96018 575 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 CSF1RP07333 972 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
CBWD3-219ENST00000622817 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 CLASRPQ8N2M8 674 aaKnown RBP8.61□□□□□ -1.03
CBWD3-219ENST00000622817 ARHGEF1Q92888 912 aaKnown RBP8.61□□□□□ -1.03
CBWD3-219ENST00000622817 IL1RAPL2Q9NP60 686 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
CBWD3-219ENST00000622817 AOX1Q06278 1338 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
CBWD3-219ENST00000622817 PDE8AO60658 829 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 MX1P20591 662 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 RFC4P35249 363 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 PDE1AP54750 535 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 TXNRD1Q16881 649 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 CCDC57Q2TAC2 916 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 TTC22Q5TAA0 569 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 USPL1Q5W0Q7 1092 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 SIL1Q9H173 461 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 STAP2Q9UGK3 403 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 SALL3Q9BXA9 1300 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 CTSWP56202 376 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 IFIT5Q13325 482 aaKnown RBP8.6□□□□□ -1.03
CBWD3-219ENST00000622817 SYNE4Q8N205 404 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
CBWD3-219ENST00000622817 TRPC6Q9Y210 931 aa8.6□□□□□ -1.03
CBWD3-219ENST00000622817 SCN7AQ01118 1682 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
CBWD3-219ENST00000622817 CIAO1O76071 339 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 SASH1O94885 1247 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 NTSR2O95665 410 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
CBWD3-219ENST00000622817 SSFA2P28290 1259 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 TTLL11Q8NHH1 800 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 GPATCH3Q96I76 525 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 BCL2L12Q9HB09 334 aa8.59□□□□□ -1.03
CBWD3-219ENST00000622817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.58□□□□□ -1.04
CBWD3-219ENST00000622817 FAM177BA6PVY3 158 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 EYA2O00167 538 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 PHF14O94880 888 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 GSPT1P15170 499 aaKnown RBP8.58□□□□□ -1.04
CBWD3-219ENST00000622817 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-219ENST00000622817 TBC1D9BQ66K14 1250 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 AACSQ86V21 672 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 AMIGO3Q86WK7 504 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
CBWD3-219ENST00000622817 ANKRD18BA2A2Z9 1011 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 HCLS1P14317 486 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 TAF7LQ5H9L4 462 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 ERC2O15083 957 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 EIF5BO60841 1220 aaKnown RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 CDC45O75419 566 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 ITGA6P23229 1130 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 TFCP2Q12800 502 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 SLC10A5Q5PT55 438 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 NBPF5PQ86XG9 351 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 GREM2Q9H772 168 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 GPR108Q9NPR9 543 aa8.57□□□□□ -1.04
CBWD3-219ENST00000622817 BMP2KQ9NSY1 1161 aaPredicted RBP8.57□□□□□ -1.04
CBWD3-219ENST00000622817 RTL9Q8NET4 1388 aa8.56□□□□□ -1.04
CBWD3-219ENST00000622817 MYH3P11055 1940 aa8.56□□□□□ -1.04
CBWD3-219ENST00000622817 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms