RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 SRCIN1Q9C0H9 1055 aa30.88■■■□□ 2.53
THSD4-207ENST00000620694 LAMB2P55268 1798 aa30.87■■■□□ 2.53
THSD4-207ENST00000620694 ALDH1L1O75891 902 aa30.87■■■□□ 2.53
THSD4-207ENST00000620694 CCDC152Q4G0S7 254 aa30.87■■■□□ 2.53
THSD4-207ENST00000620694 BRPF1P55201 1214 aaPredicted RBP30.86■■■□□ 2.53
THSD4-207ENST00000620694 ATP6V0A2Q9Y487 856 aa30.86■■■□□ 2.53
THSD4-207ENST00000620694 PRELPP51888 382 aa30.85■■■□□ 2.53
THSD4-207ENST00000620694 CASP7P55210 303 aa30.85■■■□□ 2.53
THSD4-207ENST00000620694 CTSWP56202 376 aa30.85■■■□□ 2.53
THSD4-207ENST00000620694 FKBP4Q02790 459 aaKnown RBP eCLIP30.85■■■□□ 2.53
THSD4-207ENST00000620694 GRIPAP1Q4V328 841 aa30.85■■■□□ 2.53
THSD4-207ENST00000620694 CCDC85AQ96PX6 553 aaPredicted RBP30.85■■■□□ 2.53
THSD4-207ENST00000620694 NOB1Q9ULX3 412 aaKnown RBP30.85■■■□□ 2.53
THSD4-207ENST00000620694 TMC4Q7Z404 712 aa30.83■■■□□ 2.53
THSD4-207ENST00000620694 CELF1Q92879 486 aaKnown RBP30.83■■■□□ 2.53
THSD4-207ENST00000620694 C9orf78Q9NZ63 289 aaPredicted RBP30.83■■■□□ 2.53
THSD4-207ENST00000620694 GRM8O00222 908 aa30.82■■■□□ 2.52
THSD4-207ENST00000620694 SP8Q8IXZ3 490 aa30.82■■■□□ 2.52
THSD4-207ENST00000620694 PLA2G12BQ9BX93 195 aa30.82■■■□□ 2.52
THSD4-207ENST00000620694 KIF16BQ96L93 1317 aa30.81■■■□□ 2.52
THSD4-207ENST00000620694 FER1L6Q2WGJ9 1857 aa30.81■■■□□ 2.52
THSD4-207ENST00000620694 SLC51AQ86UW1 340 aa30.81■■■□□ 2.52
THSD4-207ENST00000620694 TTLL11Q8NHH1 800 aa30.81■■■□□ 2.52
THSD4-207ENST00000620694 API5Q9BZZ5 524 aaKnown RBP30.81■■■□□ 2.52
THSD4-207ENST00000620694 SEC31BQ9NQW1 1179 aa30.81■■■□□ 2.52
THSD4-207ENST00000620694 PSMD1Q99460 953 aa30.8■■■□□ 2.52
THSD4-207ENST00000620694 RPS8P62241 208 aaKnown RBP30.79■■■□□ 2.52
THSD4-207ENST00000620694 ZNF526Q8TF50 670 aaPredicted RBP30.79■■■□□ 2.52
THSD4-207ENST00000620694 ZNF277Q9NRM2 450 aaPredicted RBP30.79■■■□□ 2.52
THSD4-207ENST00000620694 SNED1Q8TER0 1413 aa30.79■■■□□ 2.52
THSD4-207ENST00000620694 ZC3H4Q9UPT8 1303 aaKnown RBP30.77■■■□□ 2.52
THSD4-207ENST00000620694 GREM2Q9H772 168 aa30.77■■■□□ 2.52
THSD4-207ENST00000620694 BCAR3O75815 825 aa30.76■■■□□ 2.51
THSD4-207ENST00000620694 DPP8Q6V1X1 898 aaPredicted RBP30.76■■■□□ 2.51
THSD4-207ENST00000620694 MPNDQ8N594 471 aa30.76■■■□□ 2.51
THSD4-207ENST00000620694 CDC5LQ99459 802 aaKnown RBP30.76■■■□□ 2.51
THSD4-207ENST00000620694 SBF1O95248 1867 aa30.76■■■□□ 2.51
THSD4-207ENST00000620694 IPO8O15397 1037 aaKnown RBP30.75■■■□□ 2.51
THSD4-207ENST00000620694 IARSP41252 1262 aaKnown RBP30.75■■■□□ 2.51
THSD4-207ENST00000620694 ANKRD18AQ8IVF6 992 aa30.75■■■□□ 2.51
THSD4-207ENST00000620694 ARHGAP45Q92619 1136 aa30.75■■■□□ 2.51
THSD4-207ENST00000620694 GPBP1L1Q9HC44 474 aaPredicted RBP30.75■■■□□ 2.51
THSD4-207ENST00000620694 RTL9Q8NET4 1388 aa30.75■■■□□ 2.51
THSD4-207ENST00000620694 CCT4P50991 539 aaKnown RBP30.74■■■□□ 2.51
THSD4-207ENST00000620694 CSF1RP07333 972 aa30.73■■■□□ 2.51
THSD4-207ENST00000620694 SUPT20HQ8NEM7 779 aa30.73■■■□□ 2.51
THSD4-207ENST00000620694 FRAT1Q92837 279 aaPredicted RBP30.73■■■□□ 2.51
THSD4-207ENST00000620694 NBPF7P0C2Y1 421 aaPredicted RBP30.72■■■□□ 2.51
THSD4-207ENST00000620694 FOXO4P98177 505 aa30.72■■■□□ 2.51
THSD4-207ENST00000620694 UTYO14607 1347 aa30.72■■■□□ 2.51
THSD4-207ENST00000620694 FAM161AQ3B820 660 aa30.71■■■□□ 2.51
THSD4-207ENST00000620694 NSFL1CQ9UNZ2 370 aaKnown RBP30.71■■■□□ 2.51
THSD4-207ENST00000620694 TAF1P21675 1872 aa30.71■■■□□ 2.51
THSD4-207ENST00000620694 COL4A1P02462 1669 aa30.71■■■□□ 2.51
THSD4-207ENST00000620694 ITGA6P23229 1130 aa30.7■■■□□ 2.51
THSD4-207ENST00000620694 RTFDC1Q9BY42 306 aaPredicted RBP30.7■■■□□ 2.51
THSD4-207ENST00000620694 CHMP3Q9Y3E7 222 aa30.7■■■□□ 2.51
THSD4-207ENST00000620694 EPHA10Q5JZY3 1008 aa30.69■■■□□ 2.5
THSD4-207ENST00000620694 SUCLG2Q96I99 432 aa30.69■■■□□ 2.5
THSD4-207ENST00000620694 KDM2BQ8NHM5 1336 aa30.69■■■□□ 2.5
THSD4-207ENST00000620694 IGHMBP2P38935 993 aaKnown RBP30.68■■■□□ 2.5
THSD4-207ENST00000620694 GPSM2P81274 684 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 LMBR1LQ6UX01 489 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 ATF7IPQ6VMQ6 1270 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 LARGE2Q8N3Y3 721 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 JDP2Q8WYK2 163 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 USP44Q9H0E7 712 aa30.68■■■□□ 2.5
THSD4-207ENST00000620694 ANKRD18BA2A2Z9 1011 aa30.67■■■□□ 2.5
THSD4-207ENST00000620694 PPIP5K2O43314 1243 aa30.67■■■□□ 2.5
THSD4-207ENST00000620694 VPS33BQ9H267 617 aa30.67■■■□□ 2.5
THSD4-207ENST00000620694 TRIM27P14373 513 aa30.66■■■□□ 2.5
THSD4-207ENST00000620694 IFIT5Q13325 482 aaKnown RBP30.66■■■□□ 2.5
THSD4-207ENST00000620694 ZKSCAN2Q63HK3 967 aa30.66■■■□□ 2.5
THSD4-207ENST00000620694 DPY19L2Q6NUT2 758 aa30.66■■■□□ 2.5
THSD4-207ENST00000620694 BSDC1Q9NW68 430 aaPredicted RBP30.66■■■□□ 2.5
THSD4-207ENST00000620694 MYH3P11055 1940 aa30.66■■■□□ 2.5
THSD4-207ENST00000620694 CCDC88AQ3V6T2 1871 aa30.65■■■□□ 2.5
THSD4-207ENST00000620694 LRRC37AA6NMS7 1700 aa30.65■■■□□ 2.5
THSD4-207ENST00000620694 TIAM2Q8IVF5 1701 aa30.65■■■□□ 2.5
THSD4-207ENST00000620694 GLTPD2A6NH11 291 aa30.65■■■□□ 2.5
THSD4-207ENST00000620694 AOC3Q16853 763 aa30.65■■■□□ 2.5
THSD4-207ENST00000620694 C6orf229H3BNL8 230 aa30.64■■■□□ 2.5
THSD4-207ENST00000620694 KAZALD1Q96I82 304 aa30.64■■■□□ 2.5
THSD4-207ENST00000620694 MPHOSPH8Q99549 860 aa30.64■■■□□ 2.5
THSD4-207ENST00000620694 ANKIB1Q9P2G1 1089 aa30.64■■■□□ 2.5
THSD4-207ENST00000620694 CCDC57Q2TAC2 916 aa30.63■■■□□ 2.49
THSD4-207ENST00000620694 INTS3Q68E01 1043 aaKnown RBP30.63■■■□□ 2.49
THSD4-207ENST00000620694 NIM1KQ8IY84 436 aa30.63■■■□□ 2.49
THSD4-207ENST00000620694 PODXL2Q9NZ53 605 aa30.63■■■□□ 2.49
THSD4-207ENST00000620694 CLUAP1Q96AJ1 413 aa30.62■■■□□ 2.49
THSD4-207ENST00000620694 BICC1Q9H694 974 aaKnown RBP30.62■■■□□ 2.49
THSD4-207ENST00000620694 DICER1Q9UPY3 1922 aaKnown RBP30.61■■■□□ 2.49
THSD4-207ENST00000620694 KIAA2012Q0VF49 1180 aa30.61■■■□□ 2.49
THSD4-207ENST00000620694 NMRK2Q9NPI5 230 aa30.61■■■□□ 2.49
THSD4-207ENST00000620694 POLLQ9UGP5 575 aa30.61■■■□□ 2.49
THSD4-207ENST00000620694 MINPP1Q9UNW1 487 aa30.61■■■□□ 2.49
THSD4-207ENST00000620694 TNNQ9UQP3 1299 aa30.61■■■□□ 2.49
THSD4-207ENST00000620694 FZD9O00144 591 aa30.6■■■□□ 2.49
THSD4-207ENST00000620694 UBTFL1P0CB47 393 aaPredicted RBP30.6■■■□□ 2.49
THSD4-207ENST00000620694 XDHP47989 1333 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms