RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	SLC27A2	O14975	620 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	LRRC2	Q9BYS8	371 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TRIM5	Q9C035	493 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	IDH1	O75874	414 aa	Known RBP	10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	A1BG	P04217	495 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TIMM10	P62072	90 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	FBXW7	Q969H0	707 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	EDC3	Q96F86	508 aa	Known RBP	10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TM6SF1	Q9BZW5	370 aa		10.87	□□□□□ -0.67
RBFOX1-223	ENST00000620507	KAT6B	Q8WYB5	2073 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	HCLS1	P14317	486 aa	Predicted RBP	10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ME1	P48163	572 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	MTX1	Q13505	466 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ZSCAN25	Q6NSZ9	544 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	LDHAL6A	Q6ZMR3	332 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	PAG1	Q9NWQ8	432 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	NDUFB9	Q9Y6M9	179 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CCT2	P78371	535 aa	Known RBP	10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	GIMAP6	Q6P9H5	292 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	SPC24	Q8NBT2	197 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	GPT2	Q8TD30	523 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	MPHOSPH8	Q99549	860 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	NCAPD2	Q15021	1401 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CEMIP	Q8WUJ3	1361 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	DDIT3	P35638	169 aa		10.86	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ADCY9	O60503	1353 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	HMGN5	P82970	282 aa	Known RBP	10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507		Q6ZUG5	572 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	VPS37D	Q86XT2	251 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ARID3A	Q99856	593 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TRMT112	Q9UI30	125 aa	Known RBP	10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507		A0A0D9SFI3	127 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	STK38	Q15208	465 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	UBR1	Q8IWV7	1749 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	NCOA3	Q9Y6Q9	1424 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	GADD45B	O75293	160 aa	Predicted RBP	10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	SASH1	O94885	1247 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ATP5J	P18859	108 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	HSP90AB3P	Q58FF7	597 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	FAM13B	Q9NYF5	915 aa		10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TLR7	Q9NYK1	1049 aa	Known RBP	10.85	□□□□□ -0.67
RBFOX1-223	ENST00000620507	RPS6KB1	P23443	525 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ADCK5	Q3MIX3	580 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CCDC129	Q6ZRS4	1044 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CLEC17A	Q6ZS10	378 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	SLIT1	O75093	1534 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ERICH2	A1L162	156 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	KDM4A	O75164	1064 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TPM3	P06753	285 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	TPM2	P07951	284 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	AKAP17A	Q02040	695 aa	Known RBP	10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CKAP2L	Q8IYA6	745 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ZSWIM6	Q9HCJ5	1215 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	COPRS	Q9NQ92	184 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ARHGAP23	Q9P227	1491 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ANKRD18B	A2A2Z9	1011 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	PPFIA3	O75145	1194 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	IGKV5-2	P06315	115 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	HAND2	P61296	217 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	GUCY1B3	Q02153	619 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	CCDC191	Q8NCU4	936 aa		10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.84	□□□□□ -0.67
RBFOX1-223	ENST00000620507	ME3	Q16798	604 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	MON2	Q7Z3U7	1717 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	EYA2	O00167	538 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	EXOC5	O00471	708 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	UVSSA	Q2YD98	709 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	MAP4K1	Q92918	833 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CCDC34	Q96HJ3	373 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	C3	P01024	1663 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF213	O14771	459 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NRXN3	Q9Y4C0	1643 aa		10.83	□□□□□ -0.68
RBFOX1-223	ENST00000620507		A0A1B0GUL7	405 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ADCY5	O95622	1261 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	RRP12	Q5JTH9	1297 aa	Known RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	KBTBD3	Q8NAB2	608 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZNF594	Q96JF6	807 aa	Predicted RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	NAT10	Q9H0A0	1025 aa	Known RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DDX19A	Q9NUU7	478 aa	Known RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	SAFB	Q15424	915 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	TTLL7	Q6ZT98	887 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DBNL	Q9UJU6	430 aa	Known RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZDHHC9	Q9Y397	364 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	PXDNL	A1KZ92	1463 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CYP27B1	O15528	508 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	SART3	Q15020	963 aa	Known RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	HS1BP3	Q53T59	392 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	AIDA	Q96BJ3	306 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	FAM89A	Q96GI7	184 aa		10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.82	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ZFY	P08048	801 aa	Predicted RBP	10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	MCM5	P33992	734 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	FAM173B	Q6P4H8	233 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DHX32	Q7L7V1	743 aa	Known RBP	10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ERVV-2	B6SEH9	535 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	RNF113A	O15541	343 aa	Known RBP	10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	CYP2E1	P05181	493 aa	Predicted RBP	10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	ATP2B3	Q16720	1220 aa		10.81	□□□□□ -0.68
RBFOX1-223	ENST00000620507	DACT1	Q9NYF0	836 aa		10.81	□□□□□ -0.68

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