RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 SSRP1Q08945 709 aaKnown RBP18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 E2F4Q16254 413 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.69■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZBTB9Q96C00 473 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 MRFAP1L1Q96HT8 127 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PUS7Q96PZ0 661 aaKnown RBP18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CAPN7Q9Y6W3 813 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GOLGA8BA8MQT2 603 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 FCHSD2O94868 740 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PPP1R9BQ96SB3 815 aa18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.68■□□□□ 0.58
CNTNAP3B-214ENST00000618777 UBA5Q9GZZ9 404 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GOLGA6CA6NDK9 693 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CIB2O75838 187 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GOLGA6DP0CG33 693 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SLC8A1P32418 973 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZBTB17Q13105 803 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SECISBP2LQ93073 1101 aaKnown RBP18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GOLGA6AQ9NYA3 693 aa18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TDRD9Q8NDG6 1382 aaKnown RBP18.67■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PFDN1O60925 122 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LRRC23Q53EV4 343 aaPredicted RBP18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 MCTP2Q6DN12 878 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ATP2A1O14983 1001 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 F13A1P00488 732 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GRIPAP1Q4V328 841 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 KARSQ15046 597 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ANKRD50Q9ULJ7 1429 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LOC102724159A0A0B4J2E5 919 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PWP2Q15269 919 aaKnown RBP18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TTC22Q5TAA0 569 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TRIM4Q9C037 500 aa18.66■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CASQ2O14958 399 aaPredicted RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ZNF445P59923 1031 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TNNC1P63316 161 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 RAB3IL1Q8TBN0 382 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CAPZA3Q96KX2 299 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TCP11L1Q9NUJ3 509 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 HMG20BQ9P0W2 317 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 CCDC194A0A1B0GVG4 234 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SEC62Q99442 399 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 DNAI2Q9GZS0 605 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LZTFL1Q9NQ48 299 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ORC3Q9UBD5 711 aaPredicted RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 NACADO15069 1562 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 LIG3P49916 1009 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TCERG1LQ5VWI1 586 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 IFT81Q8WYA0 676 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 PIK3R5Q8WYR1 880 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 NLRP2Q9NX02 1062 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 MTRF1LQ9UGC7 380 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 TBC1D31Q96DN5 1066 aa18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 SEC63Q9UGP8 760 aaKnown RBP18.65■□□□□ 0.58
CNTNAP3B-214ENST00000618777 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 TLDC2A0PJX2 215 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IGHDP01880 384 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 POLR3DP05423 398 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SF3B2Q13435 895 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 APBB1IPQ7Z5R6 666 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 EFCAB13Q8IY85 973 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CALML4Q96GE6 196 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 SPAG5Q96R06 1193 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 BAIAP2L1Q9UHR4 511 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LMOD1P29536 600 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 MAP7Q14244 749 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 C17orf53Q8N3J3 647 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CABS1Q96KC9 395 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 BOLA2Q9H3K6 86 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NLRP6P59044 892 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 NPHP3Q7Z494 1330 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 VIMP08670 466 aaKnown RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 ODF2LQ9ULJ1 636 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 GUCA1BQ9UMX6 200 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
CNTNAP3B-214ENST00000618777 IARSP41252 1262 aaKnown RBP18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 GBP7Q8N8V2 638 aaPredicted RBP18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 UBA7P41226 1012 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 CCDC174Q6PII3 467 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 EVI5LQ96CN4 794 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 MAP7D1Q3KQU3 841 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LRRC45Q96CN5 670 aa18.63■□□□□ 0.57
CNTNAP3B-214ENST00000618777 LRRC27Q9C0I9 530 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms