RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 GRAPQ13588 217 aa23.95■■□□□ 1.42
SUSD3-205ENST00000617293 CC2D2BQ6DHV5 1058 aa23.95■■□□□ 1.42
SUSD3-205ENST00000617293 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
SUSD3-205ENST00000617293 GRAPLQ8TC17 118 aaPredicted RBP23.95■■□□□ 1.42
SUSD3-205ENST00000617293 ZNF526Q8TF50 670 aaPredicted RBP23.95■■□□□ 1.42
SUSD3-205ENST00000617293 TMX4Q9H1E5 349 aaPredicted RBP23.95■■□□□ 1.42
SUSD3-205ENST00000617293 CCDC85AQ96PX6 553 aaPredicted RBP23.94■■□□□ 1.42
SUSD3-205ENST00000617293 LTBP3Q9NS15 1303 aa23.93■■□□□ 1.42
SUSD3-205ENST00000617293 FKBP4Q02790 459 aaKnown RBP eCLIP23.93■■□□□ 1.42
SUSD3-205ENST00000617293 CCDC152Q4G0S7 254 aa23.93■■□□□ 1.42
SUSD3-205ENST00000617293 SLC51AQ86UW1 340 aa23.93■■□□□ 1.42
SUSD3-205ENST00000617293 ATP6V0A2Q9Y487 856 aa23.93■■□□□ 1.42
SUSD3-205ENST00000617293 CELF1Q92879 486 aaKnown RBP23.92■■□□□ 1.42
SUSD3-205ENST00000617293 SRCIN1Q9C0H9 1055 aa23.92■■□□□ 1.42
SUSD3-205ENST00000617293 RARSP54136 660 aaKnown RBP23.91■■□□□ 1.42
SUSD3-205ENST00000617293 CTSWP56202 376 aa23.9■■□□□ 1.42
SUSD3-205ENST00000617293 GRIPAP1Q4V328 841 aa23.9■■□□□ 1.42
SUSD3-205ENST00000617293 SP8Q8IXZ3 490 aa23.9■■□□□ 1.42
SUSD3-205ENST00000617293 SEC31BQ9NQW1 1179 aa23.9■■□□□ 1.42
SUSD3-205ENST00000617293 ZNF277Q9NRM2 450 aaPredicted RBP23.9■■□□□ 1.42
SUSD3-205ENST00000617293 NOB1Q9ULX3 412 aaKnown RBP23.9■■□□□ 1.42
SUSD3-205ENST00000617293 ALDH1L1O75891 902 aa23.89■■□□□ 1.41
SUSD3-205ENST00000617293 CASP7P55210 303 aa23.89■■□□□ 1.41
SUSD3-205ENST00000617293 TTLL11Q8NHH1 800 aa23.89■■□□□ 1.41
SUSD3-205ENST00000617293 GPBP1L1Q9HC44 474 aaPredicted RBP23.89■■□□□ 1.41
SUSD3-205ENST00000617293 C9orf78Q9NZ63 289 aaPredicted RBP23.89■■□□□ 1.41
SUSD3-205ENST00000617293 RPS8P62241 208 aaKnown RBP23.88■■□□□ 1.41
SUSD3-205ENST00000617293 TMC4Q7Z404 712 aa23.88■■□□□ 1.41
SUSD3-205ENST00000617293 PSMD1Q99460 953 aa23.88■■□□□ 1.41
SUSD3-205ENST00000617293 MYH3P11055 1940 aa23.88■■□□□ 1.41
SUSD3-205ENST00000617293 GRM8O00222 908 aa23.87■■□□□ 1.41
SUSD3-205ENST00000617293 BRPF1P55201 1214 aaPredicted RBP23.87■■□□□ 1.41
SUSD3-205ENST00000617293 PLA2G12BQ9BX93 195 aa23.87■■□□□ 1.41
SUSD3-205ENST00000617293 DICER1Q9UPY3 1922 aaKnown RBP23.86■■□□□ 1.41
SUSD3-205ENST00000617293 SNED1Q8TER0 1413 aa23.86■■□□□ 1.41
SUSD3-205ENST00000617293 ZC3H4Q9UPT8 1303 aaKnown RBP23.85■■□□□ 1.41
SUSD3-205ENST00000617293 IARSP41252 1262 aaKnown RBP23.85■■□□□ 1.41
SUSD3-205ENST00000617293 DPP8Q6V1X1 898 aaPredicted RBP23.85■■□□□ 1.41
SUSD3-205ENST00000617293 MPNDQ8N594 471 aa23.85■■□□□ 1.41
SUSD3-205ENST00000617293 GREM2Q9H772 168 aa23.85■■□□□ 1.41
SUSD3-205ENST00000617293 COL4A1P02462 1669 aa23.85■■□□□ 1.41
SUSD3-205ENST00000617293 BCAR3O75815 825 aa23.84■■□□□ 1.41
SUSD3-205ENST00000617293 TIAM2Q8IVF5 1701 aa23.84■■□□□ 1.41
SUSD3-205ENST00000617293 ANKRD18AQ8IVF6 992 aa23.83■■□□□ 1.41
SUSD3-205ENST00000617293 CDC5LQ99459 802 aaKnown RBP23.83■■□□□ 1.41
SUSD3-205ENST00000617293 API5Q9BZZ5 524 aaKnown RBP23.83■■□□□ 1.41
SUSD3-205ENST00000617293 CSF1RP07333 972 aa23.82■■□□□ 1.4
SUSD3-205ENST00000617293 NSFL1CQ9UNZ2 370 aaKnown RBP23.82■■□□□ 1.4
SUSD3-205ENST00000617293 KDM2BQ8NHM5 1336 aa23.82■■□□□ 1.4
SUSD3-205ENST00000617293 KIF16BQ96L93 1317 aa23.82■■□□□ 1.4
SUSD3-205ENST00000617293 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
SUSD3-205ENST00000617293 FOXO4P98177 505 aa23.81■■□□□ 1.4
SUSD3-205ENST00000617293 DPY19L2Q6NUT2 758 aa23.81■■□□□ 1.4
SUSD3-205ENST00000617293 SUPT20HQ8NEM7 779 aa23.81■■□□□ 1.4
SUSD3-205ENST00000617293 GLTPD2A6NH11 291 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 ITGA6P23229 1130 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 LARGE2Q8N3Y3 721 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 JDP2Q8WYK2 163 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 ARHGAP45Q92619 1136 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 FRAT1Q92837 279 aaPredicted RBP23.8■■□□□ 1.4
SUSD3-205ENST00000617293 RTFDC1Q9BY42 306 aaPredicted RBP23.8■■□□□ 1.4
SUSD3-205ENST00000617293 CHMP3Q9Y3E7 222 aa23.8■■□□□ 1.4
SUSD3-205ENST00000617293 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
SUSD3-205ENST00000617293 PPIP5K2O43314 1243 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 GPSM2P81274 684 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 EPHA10Q5JZY3 1008 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 NMRK2Q9NPI5 230 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 LRRC37AA6NMS7 1700 aa23.79■■□□□ 1.4
SUSD3-205ENST00000617293 CCT4P50991 539 aaKnown RBP23.78■■□□□ 1.4
SUSD3-205ENST00000617293 AOC3Q16853 763 aa23.78■■□□□ 1.4
SUSD3-205ENST00000617293 LMBR1LQ6UX01 489 aa23.78■■□□□ 1.4
SUSD3-205ENST00000617293 SUCLG2Q96I99 432 aa23.78■■□□□ 1.4
SUSD3-205ENST00000617293 UTYO14607 1347 aa23.78■■□□□ 1.4
SUSD3-205ENST00000617293 C6orf229H3BNL8 230 aa23.77■■□□□ 1.4
SUSD3-205ENST00000617293 IGHMBP2P38935 993 aaKnown RBP23.77■■□□□ 1.4
SUSD3-205ENST00000617293 USP44Q9H0E7 712 aa23.77■■□□□ 1.4
SUSD3-205ENST00000617293 VPS33BQ9H267 617 aa23.77■■□□□ 1.4
SUSD3-205ENST00000617293 RRAGCQ9HB90 399 aa23.77■■□□□ 1.4
SUSD3-205ENST00000617293 ANKIB1Q9P2G1 1089 aa23.77■■□□□ 1.4
SUSD3-205ENST00000617293 SPEF2Q9C093 1822 aa23.76■■□□□ 1.39
SUSD3-205ENST00000617293 ANKRD18BA2A2Z9 1011 aa23.76■■□□□ 1.39
SUSD3-205ENST00000617293 IFIT5Q13325 482 aaKnown RBP23.76■■□□□ 1.39
SUSD3-205ENST00000617293 BSDC1Q9NW68 430 aaPredicted RBP23.76■■□□□ 1.39
SUSD3-205ENST00000617293 DDNO94850 711 aaPredicted RBP23.75■■□□□ 1.39
SUSD3-205ENST00000617293 NIM1KQ8IY84 436 aa23.75■■□□□ 1.39
SUSD3-205ENST00000617293 KAZALD1Q96I82 304 aa23.75■■□□□ 1.39
SUSD3-205ENST00000617293 MPHOSPH8Q99549 860 aa23.75■■□□□ 1.39
SUSD3-205ENST00000617293 POLLQ9UGP5 575 aa23.75■■□□□ 1.39
SUSD3-205ENST00000617293 FZD9O00144 591 aa23.74■■□□□ 1.39
SUSD3-205ENST00000617293 KIF3CO14782 793 aa23.74■■□□□ 1.39
SUSD3-205ENST00000617293 CCDC57Q2TAC2 916 aa23.74■■□□□ 1.39
SUSD3-205ENST00000617293 ATF7IPQ6VMQ6 1270 aa23.74■■□□□ 1.39
SUSD3-205ENST00000617293 COL4A5P29400 1685 aa23.73■■□□□ 1.39
SUSD3-205ENST00000617293 RIMBP2O15034 1052 aa23.73■■□□□ 1.39
SUSD3-205ENST00000617293 TRIM27P14373 513 aa23.73■■□□□ 1.39
SUSD3-205ENST00000617293 KIAA2012Q0VF49 1180 aa23.73■■□□□ 1.39
SUSD3-205ENST00000617293 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
SUSD3-205ENST00000617293 TBC1D16Q8TBP0 767 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms