RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 LARP1Q6PKG0 1096 aaKnown RBP15.74■□□□□ 0.11
PCDHA11-202ENST00000616325 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
PCDHA11-202ENST00000616325 CCAR2Q8N163 923 aaKnown RBP15.74■□□□□ 0.11
PCDHA11-202ENST00000616325 CREB3L3Q68CJ9 461 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 TTC14Q96N46 770 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 USP6P35125 1406 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 NBPF6Q5VWK0 638 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 NBPF4Q96M43 638 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 CDC42BPGQ6DT37 1551 aa15.73■□□□□ 0.11
PCDHA11-202ENST00000616325 A0A0D9SFI3 127 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 SKIDA1Q1XH10 827 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 LRRN4CLQ8ND94 238 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 RIC3Q7Z5B4 369 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 MAP3K5Q99683 1374 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 SLFNL1Q499Z3 407 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 CHMP4CQ96CF2 233 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 CCDC34Q96HJ3 373 aa15.72■□□□□ 0.11
PCDHA11-202ENST00000616325 BEND3Q5T5X7 828 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 KRBA2Q6ZNG9 492 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 FTOQ9C0B1 505 aaKnown RBP eCLIP15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 IGSF1Q8N6C5 1336 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 CEP170BQ9Y4F5 1589 aaPredicted RBP15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 GYS2P54840 703 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 SNW1Q13573 536 aaKnown RBP15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 C1orf141Q5JVX7 400 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 CHST3Q7LGC8 479 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 RSPH14Q9UHP6 348 aa15.71■□□□□ 0.11
PCDHA11-202ENST00000616325 PLEKHG3A1L390 1219 aa15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 ZRSR1Q15695 479 aaKnown RBP15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 EAF2Q96CJ1 260 aaPredicted RBP15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 EPC1Q9H2F5 836 aa15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 BICC1Q9H694 974 aaKnown RBP15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 ZNF446Q9NWS9 450 aa15.71■□□□□ 0.1
PCDHA11-202ENST00000616325 SBNO1A3KN83 1393 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 SMC2O95347 1197 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 CCT2P78371 535 aaKnown RBP15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 MNS1Q8NEH6 495 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 SEC31AO94979 1220 aaKnown RBP15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 PSME1Q06323 249 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 SYCP1Q15431 976 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 HSP90AB4PQ58FF6 505 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 ESCO1Q5FWF5 840 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 UBXN4Q92575 508 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 CCDC171Q6TFL3 1326 aa15.7■□□□□ 0.1
PCDHA11-202ENST00000616325 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 TMCO3Q6UWJ1 677 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 ZNF589Q86UQ0 364 aaPredicted RBP15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 CLCN6P51797 869 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 PLA2G4DQ86XP0 818 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
PCDHA11-202ENST00000616325 URI1O94763 535 aaPredicted RBP15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 C11orf57Q6ZUT1 292 aaPredicted RBP15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 DDX46Q7L014 1031 aaKnown RBP15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 SUCLG2Q96I99 432 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 NEUROD6Q96NK8 337 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 SLC27A2O14975 620 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 KCNA6P17658 529 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 DNAI1Q9UI46 699 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 TRIM66O15016 1216 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 VPS53Q5VIR6 699 aa15.68■□□□□ 0.1
PCDHA11-202ENST00000616325 ST5P78524 1137 aa15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 FEZ2Q9UHY8 353 aaPredicted RBP15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 TNRQ92752 1358 aa15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 TOMM22Q9NS69 142 aa15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 DDX19AQ9NUU7 478 aaKnown RBP15.67■□□□□ 0.1
PCDHA11-202ENST00000616325 POLA2Q14181 598 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 CCDC191Q8NCU4 936 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 BRF1Q92994 677 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 EVI5LQ96CN4 794 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 OVOS2A0A0J9YW53 1432 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 OVOS2Q6IE36 1432 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 BIN1O00499 593 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 PNMA6AP0CW24 399 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 CYP2C19P33261 490 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 PTPN21Q16825 1174 aa15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 CLTCQ00610 1675 aaKnown RBP15.66■□□□□ 0.1
PCDHA11-202ENST00000616325 SSH2Q76I76 1423 aa15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 ZSCAN31Q96LW9 406 aaPredicted RBP15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 CCDC85AQ96PX6 553 aaPredicted RBP15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 MYD88Q99836 296 aa15.65■□□□□ 0.1
PCDHA11-202ENST00000616325 SDF4Q9BRK5 362 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms