RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MPNDQ8N594 471 aa27.03■■□□□ 1.92
TRAPPC3-208ENST00000616074 ISCA1Q9BUE6 129 aa27.03■■□□□ 1.92
TRAPPC3-208ENST00000616074 DUOX1Q9NRD9 1551 aa27.02■■□□□ 1.92
TRAPPC3-208ENST00000616074 VEGFBP49765 207 aa27.02■■□□□ 1.92
TRAPPC3-208ENST00000616074 ATP5J2-PTCD1G3V325 749 aa27.01■■□□□ 1.91
TRAPPC3-208ENST00000616074 ZNF853P0CG23 659 aa27.01■■□□□ 1.91
TRAPPC3-208ENST00000616074 HYPKQ9NX55 129 aa27.01■■□□□ 1.91
TRAPPC3-208ENST00000616074 ZNRF3Q9ULT6 936 aa27.01■■□□□ 1.91
TRAPPC3-208ENST00000616074 CXCL9Q07325 125 aa27■■□□□ 1.91
TRAPPC3-208ENST00000616074 USP50Q70EL3 339 aaPredicted RBP27■■□□□ 1.91
TRAPPC3-208ENST00000616074 FAM89AQ96GI7 184 aa27■■□□□ 1.91
TRAPPC3-208ENST00000616074 COL4A1P02462 1669 aa26.99■■□□□ 1.91
TRAPPC3-208ENST00000616074 APAF1O14727 1248 aa26.99■■□□□ 1.91
TRAPPC3-208ENST00000616074 KIAA2012Q0VF49 1180 aa26.99■■□□□ 1.91
TRAPPC3-208ENST00000616074 GPRC5DQ9NZD1 345 aa26.99■■□□□ 1.91
TRAPPC3-208ENST00000616074 TRPM7Q96QT4 1865 aa26.98■■□□□ 1.91
TRAPPC3-208ENST00000616074 RASSF10A6NK89 507 aa26.98■■□□□ 1.91
TRAPPC3-208ENST00000616074 FOXN1O15353 648 aa26.97■■□□□ 1.91
TRAPPC3-208ENST00000616074 FMR1Q06787 632 aaKnown RBP eCLIP26.97■■□□□ 1.91
TRAPPC3-208ENST00000616074 IFT57Q9NWB7 429 aa26.97■■□□□ 1.91
TRAPPC3-208ENST00000616074 CAPN15O75808 1086 aa26.96■■□□□ 1.91
TRAPPC3-208ENST00000616074 DEFB115Q30KQ5 88 aa26.96■■□□□ 1.91
TRAPPC3-208ENST00000616074 TMC4Q7Z404 712 aa26.96■■□□□ 1.91
TRAPPC3-208ENST00000616074 ADARB2Q9NS39 739 aaKnown RBP26.96■■□□□ 1.91
TRAPPC3-208ENST00000616074 GMPSP49915 693 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 SF3B3Q15393 1217 aaKnown RBP26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 RTL5Q5HYW3 569 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 CIAPIN1Q6FI81 312 aa26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 CELF1Q92879 486 aaKnown RBP26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 ABT1Q9ULW3 272 aaKnown RBP26.95■■□□□ 1.9
TRAPPC3-208ENST00000616074 RAD17O75943 681 aa26.94■■□□□ 1.9
TRAPPC3-208ENST00000616074 GNAI1P63096 354 aa26.94■■□□□ 1.9
TRAPPC3-208ENST00000616074 PHAXQ9H814 394 aaKnown RBP26.94■■□□□ 1.9
TRAPPC3-208ENST00000616074 ELL2O00472 640 aaPredicted RBP26.93■■□□□ 1.9
TRAPPC3-208ENST00000616074 TRIM28Q13263 835 aaKnown RBP26.93■■□□□ 1.9
TRAPPC3-208ENST00000616074 RIC3Q7Z5B4 369 aa26.93■■□□□ 1.9
TRAPPC3-208ENST00000616074 YDJCA8MPS7 323 aa26.92■■□□□ 1.9
TRAPPC3-208ENST00000616074 TRAF5O00463 557 aa26.92■■□□□ 1.9
TRAPPC3-208ENST00000616074 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
TRAPPC3-208ENST00000616074 GOLGA2Q08379 1002 aa26.92■■□□□ 1.9
TRAPPC3-208ENST00000616074 CDHR2Q9BYE9 1310 aa26.91■■□□□ 1.9
TRAPPC3-208ENST00000616074 IRS4O14654 1257 aaPredicted RBP26.91■■□□□ 1.9
TRAPPC3-208ENST00000616074 AIDAQ96BJ3 306 aa26.91■■□□□ 1.9
TRAPPC3-208ENST00000616074 WDR33Q9C0J8 1336 aaKnown RBP26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 TNIP1Q15025 636 aa26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 BCL2L13Q9BXK5 485 aa26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 WBP1LQ9NX94 342 aa26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 NSFL1CQ9UNZ2 370 aaKnown RBP26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 THSD7BQ9C0I4 1608 aa26.9■■□□□ 1.9
TRAPPC3-208ENST00000616074 CST9Q5W186 159 aa26.89■■□□□ 1.9
TRAPPC3-208ENST00000616074 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
TRAPPC3-208ENST00000616074 GPSM2P81274 684 aa26.88■■□□□ 1.89
TRAPPC3-208ENST00000616074 WASHC4Q2M389 1173 aa26.88■■□□□ 1.89
TRAPPC3-208ENST00000616074 ZBTB38Q8NAP3 1195 aaPredicted RBP26.88■■□□□ 1.89
TRAPPC3-208ENST00000616074 MYD88Q99836 296 aa26.88■■□□□ 1.89
TRAPPC3-208ENST00000616074 CTCFP49711 727 aaPredicted RBP26.87■■□□□ 1.89
TRAPPC3-208ENST00000616074 POLLQ9UGP5 575 aa26.87■■□□□ 1.89
TRAPPC3-208ENST00000616074 SHTN1A0MZ66 631 aa26.86■■□□□ 1.89
TRAPPC3-208ENST00000616074 HIRAP54198 1017 aaPredicted RBP26.86■■□□□ 1.89
TRAPPC3-208ENST00000616074 TRPM4Q8TD43 1214 aa26.86■■□□□ 1.89
TRAPPC3-208ENST00000616074 DBNDD1Q9H9R9 158 aa26.86■■□□□ 1.89
TRAPPC3-208ENST00000616074 PRDM10Q9NQV6 1147 aa26.86■■□□□ 1.89
TRAPPC3-208ENST00000616074 C6orf229H3BNL8 230 aa26.85■■□□□ 1.89
TRAPPC3-208ENST00000616074 RIMBP2O15034 1052 aa26.85■■□□□ 1.89
TRAPPC3-208ENST00000616074 GLIS2Q9BZE0 524 aaPredicted RBP26.85■■□□□ 1.89
TRAPPC3-208ENST00000616074 PGAP2Q9UHJ9 254 aa26.85■■□□□ 1.89
TRAPPC3-208ENST00000616074 CNOT7Q9UIV1 285 aaKnown RBP26.85■■□□□ 1.89
TRAPPC3-208ENST00000616074 RPS8P62241 208 aaKnown RBP26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 PAXIP1Q6ZW49 1069 aaPredicted RBP26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 CAPNS2Q96L46 248 aa26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 SEC31BQ9NQW1 1179 aa26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 ZBTB12Q9Y330 459 aaPredicted RBP26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 TLL2Q9Y6L7 1015 aa26.84■■□□□ 1.89
TRAPPC3-208ENST00000616074 PSMD14O00487 310 aa26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 CCDC184Q52MB2 194 aa26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 CYP4F22Q6NT55 531 aa26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 TSPYL6Q8N831 410 aa26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 CCDC191Q8NCU4 936 aa26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 GPR101Q96P66 508 aaPredicted RBP26.83■■□□□ 1.89
TRAPPC3-208ENST00000616074 PCCAP05165 728 aaPredicted RBP26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 MAP2K1Q02750 393 aaPredicted RBP26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 CCDC30Q5VVM6 783 aa26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 MICALL2Q8IY33 904 aa26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 TBC1D16Q8TBP0 767 aa26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 ZC3H15Q8WU90 426 aaKnown RBP26.82■■□□□ 1.88
TRAPPC3-208ENST00000616074 ECE2O60344 883 aa26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 CELF2O95319 508 aaKnown RBP26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 ECE1P42892 770 aa26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 LBX1P52954 281 aa26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 GRM1Q13255 1194 aa26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 JARID2Q92833 1246 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 EYA3Q99504 573 aa26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 METTL22Q9BUU2 404 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 CWC25Q9NXE8 425 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC3-208ENST00000616074 SCN9AQ15858 1988 aa26.8■■□□□ 1.88
TRAPPC3-208ENST00000616074 H7C1D1 291 aa26.8■■□□□ 1.88
TRAPPC3-208ENST00000616074 HSP90B1P14625 803 aaKnown RBP26.8■■□□□ 1.88
TRAPPC3-208ENST00000616074 DOK7Q18PE1 504 aa26.8■■□□□ 1.88
TRAPPC3-208ENST00000616074 DPF2Q92785 391 aa26.8■■□□□ 1.88
TRAPPC3-208ENST00000616074 TSR2Q969E8 191 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms