RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 TAF1P21675 1872 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 CDHR2Q9BYE9 1310 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
LINC00649-217ENST00000616030 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
LINC00649-217ENST00000616030 VEGFAP15692 232 aaPredicted RBP13.34□□□□□ -0.27
LINC00649-217ENST00000616030 HSPA6P17066 643 aa13.34□□□□□ -0.27
LINC00649-217ENST00000616030 FAM89AQ96GI7 184 aa13.34□□□□□ -0.27
LINC00649-217ENST00000616030 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 FLIIQ13045 1269 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 MYD88Q99836 296 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
LINC00649-217ENST00000616030 CWC25Q9NXE8 425 aaPredicted RBP13.33□□□□□ -0.28
LINC00649-217ENST00000616030 MAP3K2Q9Y2U5 619 aa13.33□□□□□ -0.28
LINC00649-217ENST00000616030 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
LINC00649-217ENST00000616030 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
LINC00649-217ENST00000616030 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
LINC00649-217ENST00000616030 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
LINC00649-217ENST00000616030 DDX46Q7L014 1031 aaKnown RBP13.32□□□□□ -0.28
LINC00649-217ENST00000616030 RRAGCQ9HB90 399 aa13.32□□□□□ -0.28
LINC00649-217ENST00000616030 NEURL1BA8MQ27 555 aa13.31□□□□□ -0.28
LINC00649-217ENST00000616030 E9PSI1 815 aa13.31□□□□□ -0.28
LINC00649-217ENST00000616030 G2E3Q7L622 706 aa13.31□□□□□ -0.28
LINC00649-217ENST00000616030 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
LINC00649-217ENST00000616030 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
LINC00649-217ENST00000616030 PDE8AO60658 829 aa13.3□□□□□ -0.28
LINC00649-217ENST00000616030 SLFN5Q08AF3 891 aa13.3□□□□□ -0.28
LINC00649-217ENST00000616030 GPC2Q8N158 579 aa13.3□□□□□ -0.28
LINC00649-217ENST00000616030 SUPT20HQ8NEM7 779 aa13.3□□□□□ -0.28
LINC00649-217ENST00000616030 PLA2G12BQ9BX93 195 aa13.3□□□□□ -0.28
LINC00649-217ENST00000616030 IQCA1LA6NCM1 817 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
LINC00649-217ENST00000616030 CASP7P55210 303 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 KIAA2012Q0VF49 1180 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 C16orf71Q8IYS4 520 aaPredicted RBP13.29□□□□□ -0.28
LINC00649-217ENST00000616030 TRMT2AQ8IZ69 625 aaKnown RBP13.29□□□□□ -0.28
LINC00649-217ENST00000616030 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
LINC00649-217ENST00000616030 H7C1W4 665 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 APLP1P51693 650 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 CCDC152Q4G0S7 254 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
LINC00649-217ENST00000616030 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 TMX4Q9H1E5 349 aaPredicted RBP13.28□□□□□ -0.28
LINC00649-217ENST00000616030 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
LINC00649-217ENST00000616030 PSME4Q14997 1843 aa13.27□□□□□ -0.28
LINC00649-217ENST00000616030 CTSWP56202 376 aa13.27□□□□□ -0.29
LINC00649-217ENST00000616030 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
LINC00649-217ENST00000616030 GCKRQ14397 625 aa13.27□□□□□ -0.29
LINC00649-217ENST00000616030 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
LINC00649-217ENST00000616030 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
LINC00649-217ENST00000616030 MPNDQ8N594 471 aa13.27□□□□□ -0.29
LINC00649-217ENST00000616030 ZNF609O15014 1411 aa13.27□□□□□ -0.29
LINC00649-217ENST00000616030 TCERG1O14776 1098 aaKnown RBP13.26□□□□□ -0.29
LINC00649-217ENST00000616030 PPIP5K2O43314 1243 aa13.26□□□□□ -0.29
LINC00649-217ENST00000616030 RPS8P62241 208 aaKnown RBP13.26□□□□□ -0.29
LINC00649-217ENST00000616030 AOC3Q16853 763 aa13.26□□□□□ -0.29
LINC00649-217ENST00000616030 LARGE2Q8N3Y3 721 aa13.26□□□□□ -0.29
LINC00649-217ENST00000616030 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
LINC00649-217ENST00000616030 NPM3O75607 178 aaKnown RBP13.25□□□□□ -0.29
LINC00649-217ENST00000616030 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
LINC00649-217ENST00000616030 BEND3Q5T5X7 828 aa13.25□□□□□ -0.29
LINC00649-217ENST00000616030 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
LINC00649-217ENST00000616030 TTLL11Q8NHH1 800 aa13.25□□□□□ -0.29
LINC00649-217ENST00000616030 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
LINC00649-217ENST00000616030 CSF1RP07333 972 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-217ENST00000616030 SCNN1DP51172 638 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
LINC00649-217ENST00000616030 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-217ENST00000616030 LDHDQ86WU2 507 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 SEC31BQ9NQW1 1179 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 HACL1Q9UJ83 578 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 ZNRF3Q9ULT6 936 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
LINC00649-217ENST00000616030 SPEF2Q9C093 1822 aa13.24□□□□□ -0.29
LINC00649-217ENST00000616030 PCNTO95613 3336 aa13.23□□□□□ -0.29
LINC00649-217ENST00000616030 PTPRCP08575 1304 aa13.23□□□□□ -0.29
LINC00649-217ENST00000616030 PNMA8AQ86V59 439 aaPredicted RBP13.23□□□□□ -0.29
LINC00649-217ENST00000616030 DNAJC5GQ8N7S2 189 aa13.23□□□□□ -0.29
LINC00649-217ENST00000616030 CDC5LQ99459 802 aaKnown RBP13.23□□□□□ -0.29
LINC00649-217ENST00000616030 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
LINC00649-217ENST00000616030 UTYO14607 1347 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 PASKQ96RG2 1323 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 EPHX2P34913 555 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 BRPF1P55201 1214 aaPredicted RBP13.22□□□□□ -0.29
LINC00649-217ENST00000616030 GPSM2P81274 684 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 CXCL9Q07325 125 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 ALDH1L2Q3SY69 923 aa13.22□□□□□ -0.29
LINC00649-217ENST00000616030 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms