RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
GTF2I-216ENST00000615596 DDX46Q7L014 1031 aaKnown RBP17.51■□□□□ 0.39
GTF2I-216ENST00000615596 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
GTF2I-216ENST00000615596 MRPL50Q8N5N7 158 aaKnown RBP17.51■□□□□ 0.39
GTF2I-216ENST00000615596 SSH1Q8WYL5 1049 aa17.51■□□□□ 0.39
GTF2I-216ENST00000615596 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
GTF2I-216ENST00000615596 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
GTF2I-216ENST00000615596 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
GTF2I-216ENST00000615596 ZNF526Q8TF50 670 aaPredicted RBP17.5■□□□□ 0.39
GTF2I-216ENST00000615596 CDHR2Q9BYE9 1310 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 BBOX1O75936 387 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
GTF2I-216ENST00000615596 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
GTF2I-216ENST00000615596 GRAPQ13588 217 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 GCKRQ14397 625 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 SLC51AQ86UW1 340 aa17.49■□□□□ 0.39
GTF2I-216ENST00000615596 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
GTF2I-216ENST00000615596 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 H7C1W4 665 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 PDE8AO60658 829 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 BEND3Q5T5X7 828 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
GTF2I-216ENST00000615596 ATP6V0A2Q9Y487 856 aa17.48■□□□□ 0.39
GTF2I-216ENST00000615596 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
GTF2I-216ENST00000615596 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
GTF2I-216ENST00000615596 GRIPAP1Q4V328 841 aa17.46■□□□□ 0.39
GTF2I-216ENST00000615596 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
GTF2I-216ENST00000615596 CELF1Q92879 486 aaKnown RBP17.46■□□□□ 0.39
GTF2I-216ENST00000615596 PSMD1Q99460 953 aa17.46■□□□□ 0.39
GTF2I-216ENST00000615596 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
GTF2I-216ENST00000615596 PTPRCP08575 1304 aa17.46■□□□□ 0.38
GTF2I-216ENST00000615596 CASP7P55210 303 aa17.45■□□□□ 0.38
GTF2I-216ENST00000615596 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
GTF2I-216ENST00000615596 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
GTF2I-216ENST00000615596 TMX4Q9H1E5 349 aaPredicted RBP17.45■□□□□ 0.38
GTF2I-216ENST00000615596 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
GTF2I-216ENST00000615596 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
GTF2I-216ENST00000615596 TAF1P21675 1872 aa17.44■□□□□ 0.38
GTF2I-216ENST00000615596 CTSWP56202 376 aa17.44■□□□□ 0.38
GTF2I-216ENST00000615596 TMC4Q7Z404 712 aa17.44■□□□□ 0.38
GTF2I-216ENST00000615596 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
GTF2I-216ENST00000615596 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
GTF2I-216ENST00000615596 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
GTF2I-216ENST00000615596 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
GTF2I-216ENST00000615596 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
GTF2I-216ENST00000615596 TTLL11Q8NHH1 800 aa17.43■□□□□ 0.38
GTF2I-216ENST00000615596 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
GTF2I-216ENST00000615596 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
GTF2I-216ENST00000615596 COL4A1P02462 1669 aa17.42■□□□□ 0.38
GTF2I-216ENST00000615596 IARSP41252 1262 aaKnown RBP17.42■□□□□ 0.38
GTF2I-216ENST00000615596 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
GTF2I-216ENST00000615596 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
GTF2I-216ENST00000615596 KDM2BQ8NHM5 1336 aa17.42■□□□□ 0.38
GTF2I-216ENST00000615596 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
GTF2I-216ENST00000615596 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
GTF2I-216ENST00000615596 GLTPD2A6NH11 291 aa17.41■□□□□ 0.38
GTF2I-216ENST00000615596 GRM8O00222 908 aa17.41■□□□□ 0.38
GTF2I-216ENST00000615596 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
GTF2I-216ENST00000615596 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
GTF2I-216ENST00000615596 MPNDQ8N594 471 aa17.41■□□□□ 0.38
GTF2I-216ENST00000615596 RTFDC1Q9BY42 306 aaPredicted RBP17.41■□□□□ 0.38
GTF2I-216ENST00000615596 NMRK2Q9NPI5 230 aa17.41■□□□□ 0.38
GTF2I-216ENST00000615596 GREM2Q9H772 168 aa17.4■□□□□ 0.38
GTF2I-216ENST00000615596 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
GTF2I-216ENST00000615596 KIF3CO14782 793 aa17.39■□□□□ 0.37
GTF2I-216ENST00000615596 CSF1RP07333 972 aa17.39■□□□□ 0.37
GTF2I-216ENST00000615596 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
GTF2I-216ENST00000615596 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
GTF2I-216ENST00000615596 DPY19L2Q6NUT2 758 aa17.38■□□□□ 0.37
GTF2I-216ENST00000615596 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
GTF2I-216ENST00000615596 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
GTF2I-216ENST00000615596 CDC5LQ99459 802 aaKnown RBP17.38■□□□□ 0.37
GTF2I-216ENST00000615596 LRRC37AA6NMS7 1700 aa17.38■□□□□ 0.37
GTF2I-216ENST00000615596 MYH3P11055 1940 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 COL4A5P29400 1685 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 FZD9O00144 591 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 GPSM2P81274 684 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 FOXO4P98177 505 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 RRAGCQ9HB90 399 aa17.37■□□□□ 0.37
GTF2I-216ENST00000615596 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
GTF2I-216ENST00000615596 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
GTF2I-216ENST00000615596 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
GTF2I-216ENST00000615596 AOC3Q16853 763 aa17.36■□□□□ 0.37
GTF2I-216ENST00000615596 FAM161AQ3B820 660 aa17.36■□□□□ 0.37
GTF2I-216ENST00000615596 EPHA10Q5JZY3 1008 aa17.36■□□□□ 0.37
GTF2I-216ENST00000615596 UTYO14607 1347 aa17.36■□□□□ 0.37
GTF2I-216ENST00000615596 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
GTF2I-216ENST00000615596 ITGA6P23229 1130 aa17.35■□□□□ 0.37
GTF2I-216ENST00000615596 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
GTF2I-216ENST00000615596 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
GTF2I-216ENST00000615596 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
GTF2I-216ENST00000615596 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
GTF2I-216ENST00000615596 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
GTF2I-216ENST00000615596 BCAR3O75815 825 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 C1QTNF8P60827 252 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms