RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	FAM9B	Q8IZU0	186 aa		14.06	□□□□□ -0.16
NPIPB4-222	ENST00000614197	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	14.06	□□□□□ -0.16
NPIPB4-222	ENST00000614197	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.06	□□□□□ -0.16
NPIPB4-222	ENST00000614197	ZNF541	Q9H0D2	1346 aa		14.06	□□□□□ -0.16
NPIPB4-222	ENST00000614197	CACNA1S	Q13698	1873 aa		14.06	□□□□□ -0.16
NPIPB4-222	ENST00000614197	WDR90	Q96KV7	1748 aa		14.05	□□□□□ -0.16
NPIPB4-222	ENST00000614197	POTEC	B2RU33	542 aa		14.05	□□□□□ -0.16
NPIPB4-222	ENST00000614197	EPHX2	P34913	555 aa		14.05	□□□□□ -0.16
NPIPB4-222	ENST00000614197	SF3B3	Q15393	1217 aa	Known RBP	14.05	□□□□□ -0.16
NPIPB4-222	ENST00000614197	AOC3	Q16853	763 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	CCDC152	Q4G0S7	254 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	KSR2	Q6VAB6	950 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	TSPYL6	Q8N831	410 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	METTL22	Q9BUU2	404 aa	Predicted RBP	14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	MYH16	Q9H6N6	1097 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197	MAP3K2	Q9Y2U5	619 aa		14.04	□□□□□ -0.16
NPIPB4-222	ENST00000614197		G3V3G9	751 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	SLC4A2	P04920	1241 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	PCCA	P05165	728 aa	Predicted RBP	14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	DCAF8	Q5TAQ9	597 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	KLRG1	Q96E93	195 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	EYA3	Q99504	573 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	ZNRF3	Q9ULT6	936 aa		14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	NSFL1C	Q9UNZ2	370 aa	Known RBP	14.03	□□□□□ -0.16
NPIPB4-222	ENST00000614197	CCDC88A	Q3V6T2	1871 aa		14.02	□□□□□ -0.16
NPIPB4-222	ENST00000614197	PI4KAP2	A4QPH2	592 aa		14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	C6orf229	H3BNL8	230 aa		14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	PDE8A	O60658	829 aa		14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	RPS8	P62241	208 aa	Known RBP	14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	TNIP1	Q15025	636 aa		14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	PI4KAP1	Q8N8J0	262 aa		14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	RTFDC1	Q9BY42	306 aa	Predicted RBP	14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	DICER1	Q9UPY3	1922 aa	Known RBP	14.02	□□□□□ -0.17
NPIPB4-222	ENST00000614197	ANKRD36C	Q5JPF3	1778 aa		14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	FANCI	Q9NVI1	1328 aa		14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	HTRA3	P83110	453 aa		14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	KIAA2012	Q0VF49	1180 aa		14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	FKBP5	Q13451	457 aa	Predicted RBP	14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	BCL2L13	Q9BXK5	485 aa		14.01	□□□□□ -0.17
NPIPB4-222	ENST00000614197	SNED1	Q8TER0	1413 aa		14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	WASHC4	Q2M389	1173 aa		14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CIAPIN1	Q6FI81	312 aa		14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	DNAJC5G	Q8N7S2	189 aa		14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CELF1	Q92879	486 aa	Known RBP	14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CDC5L	Q99459	802 aa	Known RBP	14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	ANKIB1	Q9P2G1	1089 aa		14	□□□□□ -0.17
NPIPB4-222	ENST00000614197	POTEI	P0CG38	1075 aa		13.99	□□□□□ -0.17
NPIPB4-222	ENST00000614197	POTEJ	P0CG39	1038 aa		13.99	□□□□□ -0.17
NPIPB4-222	ENST00000614197	USP50	Q70EL3	339 aa	Predicted RBP	13.99	□□□□□ -0.17
NPIPB4-222	ENST00000614197	ANKRD18A	Q8IVF6	992 aa		13.99	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CREBZF	Q9NS37	354 aa		13.99	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CDHR2	Q9BYE9	1310 aa		13.98	□□□□□ -0.17
NPIPB4-222	ENST00000614197	EXOSC9	Q06265	439 aa	Known RBP	13.98	□□□□□ -0.17
NPIPB4-222	ENST00000614197	FLII	Q13045	1269 aa		13.98	□□□□□ -0.17
NPIPB4-222	ENST00000614197	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.98	□□□□□ -0.17
NPIPB4-222	ENST00000614197		H7C1D1	291 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	RIMBP2	O15034	1052 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CTSW	P56202	376 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CXCL9	Q07325	125 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	PPP4R3CP	Q6ZMV5	832 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CNTROB	Q8N137	903 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	DNAAF4	Q8WXU2	420 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	JARID2	Q92833	1246 aa	Predicted RBP	13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	ADARB2	Q9NS39	739 aa	Known RBP	13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	GGA1	Q9UJY5	639 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	SCN4A	P35499	1836 aa		13.97	□□□□□ -0.17
NPIPB4-222	ENST00000614197	TMEM88B	A6NKF7	163 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	RAD17	O75943	681 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	UFL1	O94874	794 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	EPS15	P42566	896 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	GMPS	P49915	693 aa	Predicted RBP	13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	SCNN1D	P51172	638 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	GPSM2	P81274	684 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	MAP1S	Q66K74	1059 aa	Predicted RBP	13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	SLC51A	Q86UW1	340 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	JMY	Q8N9B5	988 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	SEC31B	Q9NQW1	1179 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	GPRC5D	Q9NZD1	345 aa		13.96	□□□□□ -0.17
NPIPB4-222	ENST00000614197	NEURL1B	A8MQ27	555 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	VAMP4	O75379	141 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	IGKV5-2	P06315	115 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	CWF19L2	Q2TBE0	894 aa	Known RBP	13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	G2E3	Q7L622	706 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	UBE3B	Q7Z3V4	1068 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	LINS1	Q8NG48	757 aa		13.95	□□□□□ -0.18
NPIPB4-222	ENST00000614197	ATP2B4	P23634	1241 aa		13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	IGHMBP2	P38935	993 aa	Known RBP	13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	TBC1D16	Q8TBP0	767 aa		13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	DBNDD1	Q9H9R9	158 aa		13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	PODXL2	Q9NZ53	605 aa		13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	MKRN1	Q9UHC7	482 aa	Known RBP	13.94	□□□□□ -0.18
NPIPB4-222	ENST00000614197	XDH	P47989	1333 aa		13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	RPS12	P25398	132 aa	Known RBP	13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	GCKR	Q14397	625 aa		13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	DOK7	Q18PE1	504 aa		13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	POLL	Q9UGP5	575 aa		13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	ABT1	Q9ULW3	272 aa	Known RBP	13.93	□□□□□ -0.18
NPIPB4-222	ENST00000614197	PASK	Q96RG2	1323 aa		13.92	□□□□□ -0.18
NPIPB4-222	ENST00000614197		H7C1W4	665 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms