RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 ANKRD1Q15327 319 aa19.45■□□□□ 0.7
TSKU-205ENST00000612930 HSP90AB4PQ58FF6 505 aa19.45■□□□□ 0.7
TSKU-205ENST00000612930 ALDH8A1Q9H2A2 487 aaPredicted RBP19.45■□□□□ 0.7
TSKU-205ENST00000612930 NPHP4O75161 1426 aaPredicted RBP19.45■□□□□ 0.7
TSKU-205ENST00000612930 NMIQ13287 307 aaPredicted RBP19.45■□□□□ 0.7
TSKU-205ENST00000612930 SYT10Q6XYQ8 523 aa19.45■□□□□ 0.7
TSKU-205ENST00000612930 PLCD3Q8N3E9 789 aa19.45■□□□□ 0.7
TSKU-205ENST00000612930 PPP1R13BQ96KQ4 1090 aa19.45■□□□□ 0.7
TSKU-205ENST00000612930 KDRP35968 1356 aa19.44■□□□□ 0.7
TSKU-205ENST00000612930 EVI5LQ96CN4 794 aa19.44■□□□□ 0.7
TSKU-205ENST00000612930 GOLPH3LQ9H4A5 285 aa19.44■□□□□ 0.7
TSKU-205ENST00000612930 OS9Q13438 667 aaPredicted RBP19.44■□□□□ 0.7
TSKU-205ENST00000612930 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
TSKU-205ENST00000612930 BRF1Q92994 677 aa19.44■□□□□ 0.7
TSKU-205ENST00000612930 OSBPL5Q9H0X9 879 aaPredicted RBP19.44■□□□□ 0.7
TSKU-205ENST00000612930 METP08581 1390 aa19.43■□□□□ 0.7
TSKU-205ENST00000612930 NALCNQ8IZF0 1738 aa19.43■□□□□ 0.7
TSKU-205ENST00000612930 CTAGE5O15320 804 aa19.43■□□□□ 0.7
TSKU-205ENST00000612930 ZRANB2O95218 330 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSKU-205ENST00000612930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSKU-205ENST00000612930 CEP170BQ9Y4F5 1589 aaPredicted RBP19.43■□□□□ 0.7
TSKU-205ENST00000612930 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
TSKU-205ENST00000612930 GSDMDP57764 484 aa19.43■□□□□ 0.7
TSKU-205ENST00000612930 CEBPZQ03701 1054 aaKnown RBP19.43■□□□□ 0.7
TSKU-205ENST00000612930 ARHGAP29Q52LW3 1261 aa19.43■□□□□ 0.7
TSKU-205ENST00000612930 CCAR1Q8IX12 1150 aaKnown RBP19.43■□□□□ 0.7
TSKU-205ENST00000612930 ADD1P35611 737 aaKnown RBP19.42■□□□□ 0.7
TSKU-205ENST00000612930 AOPEPQ8N6M6 819 aa19.42■□□□□ 0.7
TSKU-205ENST00000612930 FEZ2Q9UHY8 353 aaPredicted RBP19.42■□□□□ 0.7
TSKU-205ENST00000612930 HDGFL1Q5TGJ6 251 aa19.42■□□□□ 0.7
TSKU-205ENST00000612930 RAD51AP2Q09MP3 1159 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 EYA1Q99502 592 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 TRIM34Q9BYJ4 488 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 SNRKQ9NRH2 765 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 CFAP45Q9UL16 551 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 USP31Q70CQ4 1352 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 BEND3Q5T5X7 828 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 FTOQ9C0B1 505 aaKnown RBP eCLIP19.41■□□□□ 0.7
TSKU-205ENST00000612930 ANO10Q9NW15 660 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 FMN2Q9NZ56 1722 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 A2ML1A8K2U0 1454 aa19.41■□□□□ 0.7
TSKU-205ENST00000612930 A0A0D9SFI3 127 aa19.4■□□□□ 0.7
TSKU-205ENST00000612930 ARMCX5Q6P1M9 558 aa19.4■□□□□ 0.7
TSKU-205ENST00000612930 IL17REQ8NFR9 667 aa19.4■□□□□ 0.7
TSKU-205ENST00000612930 PSDA5PKW4 1024 aaPredicted RBP19.4■□□□□ 0.7
TSKU-205ENST00000612930 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
TSKU-205ENST00000612930 NEK11Q8NG66 645 aa19.4■□□□□ 0.7
TSKU-205ENST00000612930 ERCC4Q92889 916 aaPredicted RBP19.4■□□□□ 0.7
TSKU-205ENST00000612930 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
TSKU-205ENST00000612930 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.7
TSKU-205ENST00000612930 IFIT2P09913 472 aaKnown RBP19.39■□□□□ 0.7
TSKU-205ENST00000612930 ENGASEQ8NFI3 743 aa19.39■□□□□ 0.7
TSKU-205ENST00000612930 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.7
TSKU-205ENST00000612930 IMPACTQ9P2X3 320 aa19.39■□□□□ 0.7
TSKU-205ENST00000612930 RCOR1Q9UKL0 485 aa19.39■□□□□ 0.7
TSKU-205ENST00000612930 ACEP12821 1306 aa19.39■□□□□ 0.69
TSKU-205ENST00000612930 TSPYL1Q9H0U9 437 aa19.39■□□□□ 0.69
TSKU-205ENST00000612930 ORC3Q9UBD5 711 aaPredicted RBP19.39■□□□□ 0.69
TSKU-205ENST00000612930 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.69
TSKU-205ENST00000612930 H3BQV1 296 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 POLR3GO15318 223 aaPredicted RBP19.38■□□□□ 0.69
TSKU-205ENST00000612930 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 NFATC2IPQ8NCF5 419 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 GPATCH3Q96I76 525 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
TSKU-205ENST00000612930 MYH15Q9Y2K3 1946 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 CEP57L1Q8IYX8 460 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 FBXW7Q969H0 707 aa19.38■□□□□ 0.69
TSKU-205ENST00000612930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.38■□□□□ 0.69
TSKU-205ENST00000612930 GORABQ5T7V8 394 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 TMCO3Q6UWJ1 677 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 AACSQ86V21 672 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 UBXN6Q9BZV1 441 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 PI4KAP2A4QPH2 592 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 HIP1O00291 1037 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 MTX1Q13505 466 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 PI4KAP1Q8N8J0 262 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
TSKU-205ENST00000612930 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
TSKU-205ENST00000612930 ST5P78524 1137 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 TSGA10IPQ3SY00 556 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 CCDC73Q6ZRK6 1079 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 TMC6Q7Z403 805 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 ZNF589Q86UQ0 364 aaPredicted RBP19.36■□□□□ 0.69
TSKU-205ENST00000612930 XPO4Q9C0E2 1151 aaKnown RBP19.36■□□□□ 0.69
TSKU-205ENST00000612930 SEC31AO94979 1220 aaKnown RBP19.36■□□□□ 0.69
TSKU-205ENST00000612930 KCNJ6P48051 423 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 TEX35Q5T0J7 233 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 CCDC150Q8NCX0 1101 aa19.36■□□□□ 0.69
TSKU-205ENST00000612930 EIF2S2P20042 333 aaKnown RBP19.35■□□□□ 0.69
TSKU-205ENST00000612930 TPM4P67936 248 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 FAM160A1Q05DH4 1040 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 UBXN4Q92575 508 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 USP28Q96RU2 1077 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 USP6P35125 1406 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 NEO1Q92859 1461 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 ETF1P62495 437 aaKnown RBP19.35■□□□□ 0.69
TSKU-205ENST00000612930 MUM1L1Q5H9M0 696 aa19.35■□□□□ 0.69
TSKU-205ENST00000612930 SMARCE1Q969G3 411 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms