RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 SSH3Q8TE77 659 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 SMARCC1Q92922 1105 aaPredicted RBP11.07□□□□□ -0.64
CCDC47-207ENST00000612558 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
CCDC47-207ENST00000612558 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
CCDC47-207ENST00000612558 MTX1Q13505 466 aa11.06□□□□□ -0.64
CCDC47-207ENST00000612558 DSG2Q14126 1118 aa11.06□□□□□ -0.64
CCDC47-207ENST00000612558 C8orf34Q49A92 452 aa11.06□□□□□ -0.64
CCDC47-207ENST00000612558 TTLL7Q6ZT98 887 aa11.06□□□□□ -0.64
CCDC47-207ENST00000612558 PPP1R42Q7Z4L9 355 aa11.06□□□□□ -0.64
CCDC47-207ENST00000612558 ATRNO75882 1429 aa11.05□□□□□ -0.64
CCDC47-207ENST00000612558 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
CCDC47-207ENST00000612558 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
CCDC47-207ENST00000612558 ARFGEF2Q9Y6D5 1785 aa11.05□□□□□ -0.64
CCDC47-207ENST00000612558 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
CCDC47-207ENST00000612558 KCNQ2O43526 872 aa11.04□□□□□ -0.64
CCDC47-207ENST00000612558 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
CCDC47-207ENST00000612558 SIK1P57059 783 aa11.04□□□□□ -0.64
CCDC47-207ENST00000612558 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
CCDC47-207ENST00000612558 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 RAB11FIP3O75154 756 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 ZBTB3Q9H5J0 574 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 QTRT2Q9H974 415 aaKnown RBP11.03□□□□□ -0.64
CCDC47-207ENST00000612558 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-207ENST00000612558 PALLDQ8WX93 1383 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 A0A087WZG4 1122 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 APBB1O00213 710 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
CCDC47-207ENST00000612558 IL6STP40189 918 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-207ENST00000612558 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 CWC25Q9NXE8 425 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-207ENST00000612558 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
CCDC47-207ENST00000612558 NUP188Q5SRE5 1749 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 COL15A1P39059 1388 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 SMARCA5O60264 1052 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-207ENST00000612558 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 NPM2Q86SE8 214 aaKnown RBP11.02□□□□□ -0.65
CCDC47-207ENST00000612558 SEPT12Q8IYM1 358 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
CCDC47-207ENST00000612558 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
CCDC47-207ENST00000612558 AFDNP55196 1824 aaKnown RBP11.02□□□□□ -0.65
CCDC47-207ENST00000612558 TJP1Q07157 1748 aa11.02□□□□□ -0.65
CCDC47-207ENST00000612558 MAP3K15Q6ZN16 1313 aa11.01□□□□□ -0.65
CCDC47-207ENST00000612558 H7C1W4 665 aa11.01□□□□□ -0.65
CCDC47-207ENST00000612558 TRIM28Q13263 835 aaKnown RBP11.01□□□□□ -0.65
CCDC47-207ENST00000612558 INTS5Q6P9B9 1019 aaKnown RBP11.01□□□□□ -0.65
CCDC47-207ENST00000612558 GIGYF2Q6Y7W6 1299 aaKnown RBP11.01□□□□□ -0.65
CCDC47-207ENST00000612558 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
CCDC47-207ENST00000612558 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
CCDC47-207ENST00000612558 CCDC87Q9NVE4 849 aa11.01□□□□□ -0.65
CCDC47-207ENST00000612558 ERVV-1B6SEH8 477 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
CCDC47-207ENST00000612558 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
CCDC47-207ENST00000612558 CASP7P55210 303 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 ITPK1Q13572 414 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 HSP90AB3PQ58FF7 597 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 ARXQ96QS3 562 aa11□□□□□ -0.65
CCDC47-207ENST00000612558 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
CCDC47-207ENST00000612558 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-207ENST00000612558 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 EPHA10Q5JZY3 1008 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 DZIP3Q86Y13 1208 aaKnown RBP10.99□□□□□ -0.65
CCDC47-207ENST00000612558 OTUD7AQ8TE49 926 aaPredicted RBP10.99□□□□□ -0.65
CCDC47-207ENST00000612558 BCL11AQ9H165 835 aa10.99□□□□□ -0.65
CCDC47-207ENST00000612558 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
CCDC47-207ENST00000612558 OS9Q13438 667 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-207ENST00000612558 HLFQ16534 295 aa10.98□□□□□ -0.65
CCDC47-207ENST00000612558 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
CCDC47-207ENST00000612558 TTC22Q5TAA0 569 aa10.98□□□□□ -0.65
CCDC47-207ENST00000612558 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-207ENST00000612558 PTF1AQ7RTS3 328 aa10.98□□□□□ -0.65
CCDC47-207ENST00000612558 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
CCDC47-207ENST00000612558 JARID2Q92833 1246 aaPredicted RBP10.98□□□□□ -0.65
CCDC47-207ENST00000612558 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
CCDC47-207ENST00000612558 PDE1AP54750 535 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 G3BP1Q13283 466 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC47-207ENST00000612558 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 VPS9D1Q9Y2B5 631 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 NHSQ6T4R5 1651 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 BTAF1O14981 1849 aa10.97□□□□□ -0.65
CCDC47-207ENST00000612558 RREB1Q92766 1687 aa10.96□□□□□ -0.65
CCDC47-207ENST00000612558 PCCAP05165 728 aaPredicted RBP10.96□□□□□ -0.65
CCDC47-207ENST00000612558 GSPT1P15170 499 aaKnown RBP10.96□□□□□ -0.65
CCDC47-207ENST00000612558 FOXO4P98177 505 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms