RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
SEMA3B-211ENST00000612509 SSH1Q8WYL5 1049 aa23.02■■□□□ 1.28
SEMA3B-211ENST00000612509 GPBP1L1Q9HC44 474 aaPredicted RBP23.02■■□□□ 1.28
SEMA3B-211ENST00000612509 GCKRQ14397 625 aa23.01■■□□□ 1.27
SEMA3B-211ENST00000612509 BCL2L13Q9BXK5 485 aa23.01■■□□□ 1.27
SEMA3B-211ENST00000612509 PDE8AO60658 829 aa23■■□□□ 1.27
SEMA3B-211ENST00000612509 ALDH1L2Q3SY69 923 aa23■■□□□ 1.27
SEMA3B-211ENST00000612509 ATP6V0A2Q9Y487 856 aa23■■□□□ 1.27
SEMA3B-211ENST00000612509 BEND3Q5T5X7 828 aa22.99■■□□□ 1.27
SEMA3B-211ENST00000612509 UBE3BQ7Z3V4 1068 aa22.99■■□□□ 1.27
SEMA3B-211ENST00000612509 PSMD1Q99460 953 aa22.99■■□□□ 1.27
SEMA3B-211ENST00000612509 BBOX1O75936 387 aa22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 GRIPAP1Q4V328 841 aa22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 CELF1Q92879 486 aaKnown RBP22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 SMC4Q9NTJ3 1288 aa22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 PTPRCP08575 1304 aa22.98■■□□□ 1.27
SEMA3B-211ENST00000612509 H7C1W4 665 aa22.97■■□□□ 1.27
SEMA3B-211ENST00000612509 CTSWP56202 376 aa22.97■■□□□ 1.27
SEMA3B-211ENST00000612509 CCDC152Q4G0S7 254 aa22.97■■□□□ 1.27
SEMA3B-211ENST00000612509 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
SEMA3B-211ENST00000612509 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
SEMA3B-211ENST00000612509 CASP7P55210 303 aa22.96■■□□□ 1.27
SEMA3B-211ENST00000612509 SLC4A10Q6U841 1118 aa22.96■■□□□ 1.27
SEMA3B-211ENST00000612509 TMC4Q7Z404 712 aa22.96■■□□□ 1.27
SEMA3B-211ENST00000612509 TMX4Q9H1E5 349 aaPredicted RBP22.96■■□□□ 1.27
SEMA3B-211ENST00000612509 LTBP1Q14766 1721 aa22.95■■□□□ 1.26
SEMA3B-211ENST00000612509 SP8Q8IXZ3 490 aa22.95■■□□□ 1.26
SEMA3B-211ENST00000612509 CCDC85AQ96PX6 553 aaPredicted RBP22.95■■□□□ 1.26
SEMA3B-211ENST00000612509 SPEF2Q9C093 1822 aa22.95■■□□□ 1.26
SEMA3B-211ENST00000612509 COL4A5P29400 1685 aa22.94■■□□□ 1.26
SEMA3B-211ENST00000612509 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
SEMA3B-211ENST00000612509 IARSP41252 1262 aaKnown RBP22.94■■□□□ 1.26
SEMA3B-211ENST00000612509 PLA2G12BQ9BX93 195 aa22.94■■□□□ 1.26
SEMA3B-211ENST00000612509 SEC31BQ9NQW1 1179 aa22.94■■□□□ 1.26
SEMA3B-211ENST00000612509 RTL9Q8NET4 1388 aa22.93■■□□□ 1.26
SEMA3B-211ENST00000612509 ALDH1L1O75891 902 aa22.93■■□□□ 1.26
SEMA3B-211ENST00000612509 SRCIN1Q9C0H9 1055 aa22.93■■□□□ 1.26
SEMA3B-211ENST00000612509 TTLL11Q8NHH1 800 aa22.92■■□□□ 1.26
SEMA3B-211ENST00000612509 WDR90Q96KV7 1748 aa22.91■■□□□ 1.26
SEMA3B-211ENST00000612509 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
SEMA3B-211ENST00000612509 DPP8Q6V1X1 898 aaPredicted RBP22.91■■□□□ 1.26
SEMA3B-211ENST00000612509 NMRK2Q9NPI5 230 aa22.91■■□□□ 1.26
SEMA3B-211ENST00000612509 GRM8O00222 908 aa22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 KIF3CO14782 793 aa22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 RARSP54136 660 aaKnown RBP22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 RPS8P62241 208 aaKnown RBP22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 MPNDQ8N594 471 aa22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 RTFDC1Q9BY42 306 aaPredicted RBP22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 GREM2Q9H772 168 aa22.9■■□□□ 1.26
SEMA3B-211ENST00000612509 BRPF1P55201 1214 aaPredicted RBP22.89■■□□□ 1.25
SEMA3B-211ENST00000612509 SUPT20HQ8NEM7 779 aa22.89■■□□□ 1.25
SEMA3B-211ENST00000612509 CDC5LQ99459 802 aaKnown RBP22.89■■□□□ 1.25
SEMA3B-211ENST00000612509 FAM161AQ3B820 660 aa22.88■■□□□ 1.25
SEMA3B-211ENST00000612509 ANKRD18AQ8IVF6 992 aa22.88■■□□□ 1.25
SEMA3B-211ENST00000612509 KIF16BQ96L93 1317 aa22.87■■□□□ 1.25
SEMA3B-211ENST00000612509 ZNF541Q9H0D2 1346 aa22.87■■□□□ 1.25
SEMA3B-211ENST00000612509 PPIP5K2O43314 1243 aa22.87■■□□□ 1.25
SEMA3B-211ENST00000612509 LARGE2Q8N3Y3 721 aa22.87■■□□□ 1.25
SEMA3B-211ENST00000612509 C9orf78Q9NZ63 289 aaPredicted RBP22.87■■□□□ 1.25
SEMA3B-211ENST00000612509 AOC3Q16853 763 aa22.86■■□□□ 1.25
SEMA3B-211ENST00000612509 DPY19L2Q6NUT2 758 aa22.86■■□□□ 1.25
SEMA3B-211ENST00000612509 JDP2Q8WYK2 163 aa22.86■■□□□ 1.25
SEMA3B-211ENST00000612509 NOB1Q9ULX3 412 aaKnown RBP22.86■■□□□ 1.25
SEMA3B-211ENST00000612509 FZD9O00144 591 aa22.85■■□□□ 1.25
SEMA3B-211ENST00000612509 CSF1RP07333 972 aa22.85■■□□□ 1.25
SEMA3B-211ENST00000612509 GPSM2P81274 684 aa22.85■■□□□ 1.25
SEMA3B-211ENST00000612509 VPS33BQ9H267 617 aa22.85■■□□□ 1.25
SEMA3B-211ENST00000612509 NSFL1CQ9UNZ2 370 aaKnown RBP22.85■■□□□ 1.25
SEMA3B-211ENST00000612509 UTYO14607 1347 aa22.84■■□□□ 1.25
SEMA3B-211ENST00000612509 ITGA6P23229 1130 aa22.84■■□□□ 1.25
SEMA3B-211ENST00000612509 FOXO4P98177 505 aa22.84■■□□□ 1.25
SEMA3B-211ENST00000612509 NIM1KQ8IY84 436 aa22.84■■□□□ 1.25
SEMA3B-211ENST00000612509 API5Q9BZZ5 524 aaKnown RBP22.84■■□□□ 1.25
SEMA3B-211ENST00000612509 DDNO94850 711 aaPredicted RBP22.83■■□□□ 1.25
SEMA3B-211ENST00000612509 C1QTNF8P60827 252 aa22.83■■□□□ 1.25
SEMA3B-211ENST00000612509 KIAA2012Q0VF49 1180 aa22.83■■□□□ 1.25
SEMA3B-211ENST00000612509 EPHA10Q5JZY3 1008 aa22.83■■□□□ 1.25
SEMA3B-211ENST00000612509 RRAGCQ9HB90 399 aa22.83■■□□□ 1.25
SEMA3B-211ENST00000612509 A0A1B0GUL6 1792 aa22.82■■□□□ 1.24
SEMA3B-211ENST00000612509 NBPF7P0C2Y1 421 aaPredicted RBP22.82■■□□□ 1.24
SEMA3B-211ENST00000612509 SUCLG2Q96I99 432 aa22.82■■□□□ 1.24
SEMA3B-211ENST00000612509 PODXL2Q9NZ53 605 aa22.82■■□□□ 1.24
SEMA3B-211ENST00000612509 SCN4AP35499 1836 aa22.81■■□□□ 1.24
SEMA3B-211ENST00000612509 IGHMBP2P38935 993 aaKnown RBP22.81■■□□□ 1.24
SEMA3B-211ENST00000612509 BSDC1Q9NW68 430 aaPredicted RBP22.81■■□□□ 1.24
SEMA3B-211ENST00000612509 POLLQ9UGP5 575 aa22.81■■□□□ 1.24
SEMA3B-211ENST00000612509 CHMP3Q9Y3E7 222 aa22.81■■□□□ 1.24
SEMA3B-211ENST00000612509 ANKRD18BA2A2Z9 1011 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 UFL1O94874 794 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 CCT4P50991 539 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 TBC1D16Q8TBP0 767 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 ANKIB1Q9P2G1 1089 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 XDHP47989 1333 aa22.8■■□□□ 1.24
SEMA3B-211ENST00000612509 C6orf229H3BNL8 230 aa22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 BCAR3O75815 825 aa22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 VEGFAP15692 232 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-211ENST00000612509 ARHGAP45Q92619 1136 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms