RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 APAF1O14727 1248 aa23.08■■□□□ 1.29
SSBP1-215ENST00000612337 EPS15P42566 896 aa23.08■■□□□ 1.29
SSBP1-215ENST00000612337 TMC4Q7Z404 712 aa23.08■■□□□ 1.29
SSBP1-215ENST00000612337 ZNRF3Q9ULT6 936 aa23.08■■□□□ 1.29
SSBP1-215ENST00000612337 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
SSBP1-215ENST00000612337 TAF1P21675 1872 aa23.07■■□□□ 1.28
SSBP1-215ENST00000612337 ATP5J2-PTCD1G3V325 749 aa23.06■■□□□ 1.28
SSBP1-215ENST00000612337 GNAI1P63096 354 aa23.06■■□□□ 1.28
SSBP1-215ENST00000612337 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
SSBP1-215ENST00000612337 TRIM28Q13263 835 aaKnown RBP23.06■■□□□ 1.28
SSBP1-215ENST00000612337 USP50Q70EL3 339 aaPredicted RBP23.06■■□□□ 1.28
SSBP1-215ENST00000612337 ZNF428Q96B54 188 aa23.06■■□□□ 1.28
SSBP1-215ENST00000612337 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
SSBP1-215ENST00000612337 CXCL9Q07325 125 aa23.05■■□□□ 1.28
SSBP1-215ENST00000612337 SF3B3Q15393 1217 aaKnown RBP23.05■■□□□ 1.28
SSBP1-215ENST00000612337 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
SSBP1-215ENST00000612337 VEGFBP49765 207 aa23.04■■□□□ 1.28
SSBP1-215ENST00000612337 TNS4Q8IZW8 715 aa23.04■■□□□ 1.28
SSBP1-215ENST00000612337 GPRC5DQ9NZD1 345 aa23.04■■□□□ 1.28
SSBP1-215ENST00000612337 RASSF10A6NK89 507 aa23.03■■□□□ 1.28
SSBP1-215ENST00000612337 ADARB2Q9NS39 739 aaKnown RBP23.03■■□□□ 1.28
SSBP1-215ENST00000612337 DUOX1Q9NRD9 1551 aa23.02■■□□□ 1.28
SSBP1-215ENST00000612337 GOLGA2Q08379 1002 aa23.02■■□□□ 1.28
SSBP1-215ENST00000612337 CIAPIN1Q6FI81 312 aa23.02■■□□□ 1.28
SSBP1-215ENST00000612337 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
SSBP1-215ENST00000612337 RIC3Q7Z5B4 369 aa23.01■■□□□ 1.27
SSBP1-215ENST00000612337 CELF1Q92879 486 aaKnown RBP23.01■■□□□ 1.27
SSBP1-215ENST00000612337 CDHR2Q9BYE9 1310 aa23.01■■□□□ 1.27
SSBP1-215ENST00000612337 ELL2O00472 640 aaPredicted RBP23■■□□□ 1.27
SSBP1-215ENST00000612337 GMPSP49915 693 aaPredicted RBP23■■□□□ 1.27
SSBP1-215ENST00000612337 TNIP1Q15025 636 aa23■■□□□ 1.27
SSBP1-215ENST00000612337 DEFB115Q30KQ5 88 aa23■■□□□ 1.27
SSBP1-215ENST00000612337 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
SSBP1-215ENST00000612337 RAD17O75943 681 aa22.99■■□□□ 1.27
SSBP1-215ENST00000612337 RTL5Q5HYW3 569 aaPredicted RBP22.99■■□□□ 1.27
SSBP1-215ENST00000612337 ABT1Q9ULW3 272 aaKnown RBP22.99■■□□□ 1.27
SSBP1-215ENST00000612337 ZBTB38Q8NAP3 1195 aaPredicted RBP22.98■■□□□ 1.27
SSBP1-215ENST00000612337 C8orf58Q8NAV2 365 aa22.98■■□□□ 1.27
SSBP1-215ENST00000612337 CHMP4AQ9BY43 222 aa22.98■■□□□ 1.27
SSBP1-215ENST00000612337 TRPM7Q96QT4 1865 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 YDJCA8MPS7 323 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 FOXN1O15353 648 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 HSP90B1P14625 803 aaKnown RBP22.97■■□□□ 1.27
SSBP1-215ENST00000612337 FMR1Q06787 632 aaKnown RBP eCLIP22.97■■□□□ 1.276e-18■■■■■ 44.1
SSBP1-215ENST00000612337 WASHC4Q2M389 1173 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 BCL2L13Q9BXK5 485 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 NSFL1CQ9UNZ2 370 aaKnown RBP22.97■■□□□ 1.27
SSBP1-215ENST00000612337 COL4A1P02462 1669 aa22.97■■□□□ 1.27
SSBP1-215ENST00000612337 CCDC191Q8NCU4 936 aa22.96■■□□□ 1.27
SSBP1-215ENST00000612337 AIDAQ96BJ3 306 aa22.96■■□□□ 1.27
SSBP1-215ENST00000612337 MYD88Q99836 296 aa22.96■■□□□ 1.27
SSBP1-215ENST00000612337 TRAF5O00463 557 aa22.95■■□□□ 1.26
SSBP1-215ENST00000612337 RPS8P62241 208 aaKnown RBP22.95■■□□□ 1.26
SSBP1-215ENST00000612337 CCDC30Q5VVM6 783 aa22.95■■□□□ 1.26
SSBP1-215ENST00000612337 WDR33Q9C0J8 1336 aaKnown RBP22.95■■□□□ 1.26
SSBP1-215ENST00000612337 WBP1LQ9NX94 342 aa22.95■■□□□ 1.26
SSBP1-215ENST00000612337 GPSM2P81274 684 aa22.94■■□□□ 1.26
SSBP1-215ENST00000612337 CST9Q5W186 159 aa22.94■■□□□ 1.26
SSBP1-215ENST00000612337 POLLQ9UGP5 575 aa22.94■■□□□ 1.26
SSBP1-215ENST00000612337 PGAP2Q9UHJ9 254 aa22.94■■□□□ 1.26
SSBP1-215ENST00000612337 C6orf229H3BNL8 230 aa22.93■■□□□ 1.26
SSBP1-215ENST00000612337 DDX58O95786 925 aaKnown RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 PCCAP05165 728 aaPredicted RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 CTCFP49711 727 aaPredicted RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 ZC3H15Q8WU90 426 aaKnown RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 METTL22Q9BUU2 404 aaPredicted RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 PRDM10Q9NQV6 1147 aa22.93■■□□□ 1.26
SSBP1-215ENST00000612337 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 CNOT7Q9UIV1 285 aaKnown RBP22.93■■□□□ 1.26
SSBP1-215ENST00000612337 HIRAP54198 1017 aaPredicted RBP22.92■■□□□ 1.26
SSBP1-215ENST00000612337 CCDC184Q52MB2 194 aa22.92■■□□□ 1.26
SSBP1-215ENST00000612337 EYA3Q99504 573 aa22.92■■□□□ 1.26
SSBP1-215ENST00000612337 DBNDD1Q9H9R9 158 aa22.92■■□□□ 1.26
SSBP1-215ENST00000612337 PSMD14O00487 310 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 RIMBP2O15034 1052 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 CAPN15O75808 1086 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 CCDC152Q4G0S7 254 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 TSPYL6Q8N831 410 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 TBC1D16Q8TBP0 767 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 TRPM4Q8TD43 1214 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 DPF2Q92785 391 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 TLL2Q9Y6L7 1015 aa22.91■■□□□ 1.26
SSBP1-215ENST00000612337 H7C1D1 291 aa22.9■■□□□ 1.26
SSBP1-215ENST00000612337 PDE8AO60658 829 aa22.9■■□□□ 1.26
SSBP1-215ENST00000612337 MAP2K1Q02750 393 aaPredicted RBP22.9■■□□□ 1.26
SSBP1-215ENST00000612337 PODXL2Q9NZ53 605 aa22.9■■□□□ 1.26
SSBP1-215ENST00000612337 SHTN1A0MZ66 631 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 ECE2O60344 883 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 ECE1P42892 770 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 MICALL2Q8IY33 904 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.25
SSBP1-215ENST00000612337 CAPNS2Q96L46 248 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 GLIS2Q9BZE0 524 aaPredicted RBP22.89■■□□□ 1.25
SSBP1-215ENST00000612337 MAP3K2Q9Y2U5 619 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 ZBTB12Q9Y330 459 aaPredicted RBP22.89■■□□□ 1.25
SSBP1-215ENST00000612337 THSD7BQ9C0I4 1608 aa22.89■■□□□ 1.25
SSBP1-215ENST00000612337 CELF2O95319 508 aaKnown RBP22.88■■□□□ 1.25
SSBP1-215ENST00000612337 PAXIP1Q6ZW49 1069 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms