RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-208ENST00000612050 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
CBWD3-208ENST00000612050 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
CBWD3-208ENST00000612050 NMRK2Q9NPI5 230 aa15.7■□□□□ 0.1
CBWD3-208ENST00000612050 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-208ENST00000612050 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
CBWD3-208ENST00000612050 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-208ENST00000612050 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
CBWD3-208ENST00000612050 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
CBWD3-208ENST00000612050 VPS33BQ9H267 617 aa15.69■□□□□ 0.1
CBWD3-208ENST00000612050 RRAGCQ9HB90 399 aa15.69■□□□□ 0.1
CBWD3-208ENST00000612050 ZNF521Q96K83 1311 aa15.69■□□□□ 0.1
CBWD3-208ENST00000612050 KIF3CO14782 793 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 LARGE2Q8N3Y3 721 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 MPNDQ8N594 471 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 G2E3Q7L622 706 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 LINS1Q8NG48 757 aa15.68■□□□□ 0.1
CBWD3-208ENST00000612050 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
CBWD3-208ENST00000612050 NEURL1BA8MQ27 555 aa15.67■□□□□ 0.1
CBWD3-208ENST00000612050 PPIP5K2O43314 1243 aa15.67■□□□□ 0.1
CBWD3-208ENST00000612050 PRELPP51888 382 aa15.67■□□□□ 0.1
CBWD3-208ENST00000612050 OLFM4Q6UX06 510 aa15.67■□□□□ 0.1
CBWD3-208ENST00000612050 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
CBWD3-208ENST00000612050 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
CBWD3-208ENST00000612050 MYH3P11055 1940 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 IGKV5-2P06315 115 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 RPS8P62241 208 aaKnown RBP15.65■□□□□ 0.1
CBWD3-208ENST00000612050 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 FSTL1Q12841 308 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
CBWD3-208ENST00000612050 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 EYA3Q99504 573 aa15.65■□□□□ 0.1
CBWD3-208ENST00000612050 WDR90Q96KV7 1748 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 G3V3G9 751 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 CT47B1P0C2W7 299 aaPredicted RBP15.64■□□□□ 0.09
CBWD3-208ENST00000612050 CTSWP56202 376 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 GCKRQ14397 625 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 SLC4A10Q6U841 1118 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 SMC1BQ8NDV3 1235 aa15.64■□□□□ 0.09
CBWD3-208ENST00000612050 NSFL1CQ9UNZ2 370 aaKnown RBP15.64■□□□□ 0.09
CBWD3-208ENST00000612050 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
CBWD3-208ENST00000612050 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
CBWD3-208ENST00000612050 GPC2Q8N158 579 aa15.63■□□□□ 0.09
CBWD3-208ENST00000612050 PTPRCP08575 1304 aa15.63■□□□□ 0.09
CBWD3-208ENST00000612050 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
CBWD3-208ENST00000612050 FZD9O00144 591 aa15.62■□□□□ 0.09
CBWD3-208ENST00000612050 MIER1Q8N108 512 aa15.62■□□□□ 0.09
CBWD3-208ENST00000612050 JARID2Q92833 1246 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-208ENST00000612050 CELF1Q92879 486 aaKnown RBP15.62■□□□□ 0.09
CBWD3-208ENST00000612050 RTFDC1Q9BY42 306 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-208ENST00000612050 C9orf78Q9NZ63 289 aaPredicted RBP15.62■□□□□ 0.09
CBWD3-208ENST00000612050 ANKIB1Q9P2G1 1089 aa15.62■□□□□ 0.09
CBWD3-208ENST00000612050 SCN4AP35499 1836 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 H7C1W4 665 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 HSPA6P17066 643 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 IGHMBP2P38935 993 aaKnown RBP15.61■□□□□ 0.09
CBWD3-208ENST00000612050 AOC3Q16853 763 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 WASHC4Q2M389 1173 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 ALDH1L2Q3SY69 923 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 CCDC85AQ96PX6 553 aaPredicted RBP15.61■□□□□ 0.09
CBWD3-208ENST00000612050 SRCIN1Q9C0H9 1055 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 GJA3Q9Y6H8 435 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 TAF1P21675 1872 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 LRRC37AA6NMS7 1700 aa15.61■□□□□ 0.09
CBWD3-208ENST00000612050 F6X3S4 739 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 SMC4Q9NTJ3 1288 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 ZNRF3Q9ULT6 936 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 TNIP1Q15025 636 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
CBWD3-208ENST00000612050 L3MBTL3Q96JM7 780 aaPredicted RBP15.6■□□□□ 0.09
CBWD3-208ENST00000612050 MPHOSPH8Q99549 860 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
CBWD3-208ENST00000612050 CHMP3Q9Y3E7 222 aa15.6■□□□□ 0.09
CBWD3-208ENST00000612050 ZNF541Q9H0D2 1346 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 APLP1P51693 650 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 HNRNPUQ00839 825 aaKnown RBP eCLIP15.59■□□□□ 0.09
CBWD3-208ENST00000612050 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 CDCA7LQ96GN5 454 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 PLA2G12BQ9BX93 195 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 GGA1Q9UJY5 639 aa15.59■□□□□ 0.09
CBWD3-208ENST00000612050 RTL9Q8NET4 1388 aa15.58■□□□□ 0.08
CBWD3-208ENST00000612050 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
CBWD3-208ENST00000612050 GRM8O00222 908 aa15.58■□□□□ 0.08
CBWD3-208ENST00000612050 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
CBWD3-208ENST00000612050 MRPL50Q8N5N7 158 aaKnown RBP15.58■□□□□ 0.08
CBWD3-208ENST00000612050 XDHP47989 1333 aa15.58■□□□□ 0.08
CBWD3-208ENST00000612050 UFL1O94874 794 aa15.57■□□□□ 0.08
CBWD3-208ENST00000612050 GPSM2P81274 684 aa15.57■□□□□ 0.08
CBWD3-208ENST00000612050 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms