RNA–Protein interactions for RNA: ENST00000611947.1

U3.50-201, humanhuman

BASIC

Gene U3, Length 228 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.50-201ENST00000611947 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
U3.50-201ENST00000611947 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
U3.50-201ENST00000611947 TNIP1Q15025 636 aa11.88□□□□□ -0.51
U3.50-201ENST00000611947 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
U3.50-201ENST00000611947 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
U3.50-201ENST00000611947 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
U3.50-201ENST00000611947 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
U3.50-201ENST00000611947 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
U3.50-201ENST00000611947 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
U3.50-201ENST00000611947 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
U3.50-201ENST00000611947 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
U3.50-201ENST00000611947 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
U3.50-201ENST00000611947 EPS15P42566 896 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 SCNN1DP51172 638 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 CXCL9Q07325 125 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 CIAPIN1Q6FI81 312 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
U3.50-201ENST00000611947 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 BCL2L13Q9BXK5 485 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
U3.50-201ENST00000611947 GPRC5DQ9NZD1 345 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
U3.50-201ENST00000611947 LAMB2P55268 1798 aa11.86□□□□□ -0.51
U3.50-201ENST00000611947 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
U3.50-201ENST00000611947 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
U3.50-201ENST00000611947 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 EYA3Q99504 573 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 STK31Q9BXU1 1019 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
U3.50-201ENST00000611947 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
U3.50-201ENST00000611947 COL4A5P29400 1685 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 DEFB115Q30KQ5 88 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
U3.50-201ENST00000611947 COL13A1Q5TAT6 717 aaPredicted RBP11.84□□□□□ -0.51
U3.50-201ENST00000611947 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
U3.50-201ENST00000611947 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 MYD88Q99836 296 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
U3.50-201ENST00000611947 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
U3.50-201ENST00000611947 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
U3.50-201ENST00000611947 H7C1D1 291 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 ANP32CO43423 234 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 RAD17O75943 681 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
U3.50-201ENST00000611947 GMPSP49915 693 aaPredicted RBP11.83□□□□□ -0.52
U3.50-201ENST00000611947 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 SLC51AQ86UW1 340 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
U3.50-201ENST00000611947 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
U3.50-201ENST00000611947 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
U3.50-201ENST00000611947 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 G3V3G9 751 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 PDE8AO60658 829 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 VEGFBP49765 207 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 KSR2Q6VAB6 950 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 WWC1Q8IX03 1113 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
U3.50-201ENST00000611947 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
U3.50-201ENST00000611947 IL16Q14005 1332 aa11.82□□□□□ -0.52
U3.50-201ENST00000611947 TAF1P21675 1872 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 ECE1P42892 770 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 GPSM2P81274 684 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 DPF2Q92785 391 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 CNOT7Q9UIV1 285 aaKnown RBP11.81□□□□□ -0.52
U3.50-201ENST00000611947 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
U3.50-201ENST00000611947 PI4KAP2A4QPH2 592 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
U3.50-201ENST00000611947 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
U3.50-201ENST00000611947 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
U3.50-201ENST00000611947 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 TSPYL6Q8N831 410 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 PI4KAP1Q8N8J0 262 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 TBC1D16Q8TBP0 767 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
U3.50-201ENST00000611947 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 POLLQ9UGP5 575 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 LRRC37AA6NMS7 1700 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
U3.50-201ENST00000611947 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
U3.50-201ENST00000611947 YDJCA8MPS7 323 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
U3.50-201ENST00000611947 CCDC184Q52MB2 194 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
U3.50-201ENST00000611947 ANKRD18AQ8IVF6 992 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
U3.50-201ENST00000611947 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
U3.50-201ENST00000611947 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms