RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 TMOD3Q9NYL9 352 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 EIF2AK4Q9P2K8 1649 aaKnown RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 TOM1O60784 492 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 CKAP4Q07065 602 aaKnown RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 CCDC196A0A1B0GTZ2 297 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 EBAG9O00559 213 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 PPP1R42Q7Z4L9 355 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 RSRC1Q96IZ7 334 aaKnown RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 ZFP91Q96JP5 570 aaPredicted RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 TMX1Q9H3N1 280 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 AP1ARQ63HQ0 302 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 GAS2L3Q86XJ1 694 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 HYPKQ9NX55 129 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 TEX14Q8IWB6 1497 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 RBM5P52756 815 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 CCT2P78371 535 aaKnown RBP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 FKBP15Q5T1M5 1219 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 SYT10Q6XYQ8 523 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 SUDS3Q9H7L9 328 aaPredicted RBP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 TMEM63CQ9P1W3 806 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 AK2P54819 239 aa10.47□□□□□ -0.73
COL25A1-208ENST00000610288 IBTKQ9P2D0 1353 aaPredicted RBP10.47□□□□□ -0.73
COL25A1-208ENST00000610288 A0A087WZG4 1122 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 VAMP4O75379 141 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 IFIT5Q13325 482 aaKnown RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 ENOX2Q16206 610 aaKnown RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 ORC3Q9UBD5 711 aaPredicted RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 GPATCH8Q9UKJ3 1502 aaKnown RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 GOLGA8BA8MQT2 603 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 HSPA4P34932 840 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 SYKP43405 635 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 ATP8B2P98198 1209 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 CEP85Q6P2H3 762 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 RPAINQ86UA6 219 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 NAPBQ9H115 298 aa10.46□□□□□ -0.73
COL25A1-208ENST00000610288 RBM8AQ9Y5S9 174 aaKnown RBP10.46□□□□□ -0.73
COL25A1-208ENST00000610288 MINDY4BA8MYZ0 360 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 ZBTB7BO15156 539 aaPredicted RBP10.46□□□□□ -0.74
COL25A1-208ENST00000610288 NBPF11Q86T75 865 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 GTF3C6Q969F1 213 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 CCDC175P0C221 793 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 ANTXR1Q9H6X2 564 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 PIK3R4Q99570 1358 aa10.46□□□□□ -0.74
COL25A1-208ENST00000610288 CHMLP26374 656 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 ALS2CR12Q96Q35 445 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL25A1-208ENST00000610288 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 FBLN1P23142 703 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 BRF1Q92994 677 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
COL25A1-208ENST00000610288 POTEDQ86YR6 584 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
COL25A1-208ENST00000610288 BICRAQ9NZM4 1560 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 PI4KAP2A4QPH2 592 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 SEPT7Q16181 437 aaKnown RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ATL3Q6DD88 541 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 PI4KAP1Q8N8J0 262 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 WDR66Q8TBY9 1149 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 VPS18Q9P253 973 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ZNF652Q9Y2D9 606 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 SPATA31E1Q6ZUB1 1445 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 OPA1O60313 960 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 BRD1O95696 1058 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 MAP3K12Q12852 859 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 C17orf53Q8N3J3 647 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 PYM1Q9BRP8 204 aaKnown RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 MAP3K2Q9Y2U5 619 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 CTAGE9A4FU28 777 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 HSF2BPO75031 334 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 POLR3DP05423 398 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ZNF75DP51815 510 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 EVCP57679 992 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 SPAG1Q07617 926 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 NAA25Q14CX7 972 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 CAVIN4Q5BKX8 364 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 CERS3Q8IU89 383 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ANKRD18AQ8IVF6 992 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ARID4AP29374 1257 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-208ENST00000610288 USP5P45974 858 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 IFFO1Q0D2I5 559 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 HDXQ7Z353 690 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 C8orf58Q8NAV2 365 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 ZBTB3Q9H5J0 574 aa10.44□□□□□ -0.74
COL25A1-208ENST00000610288 FANCAO15360 1455 aa10.43□□□□□ -0.74
COL25A1-208ENST00000610288 ACEP12821 1306 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms