RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 MYD88Q99836 296 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
LINC01001-203ENST00000607448 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
LINC01001-203ENST00000607448 AAMPQ13685 434 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 WDR63Q8IWG1 891 aa13.32□□□□□ -0.28
LINC01001-203ENST00000607448 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
LINC01001-203ENST00000607448 DUOX1Q9NRD9 1551 aa13.31□□□□□ -0.28
LINC01001-203ENST00000607448 POTECB2RU33 542 aa13.31□□□□□ -0.28
LINC01001-203ENST00000607448 JARID2Q92833 1246 aaPredicted RBP13.31□□□□□ -0.28
LINC01001-203ENST00000607448 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
LINC01001-203ENST00000607448 SCN4AP35499 1836 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 VAMP4O75379 141 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 TOMM70O94826 608 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
LINC01001-203ENST00000607448 PI4KAP2A4QPH2 592 aa13.29□□□□□ -0.28
LINC01001-203ENST00000607448 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
LINC01001-203ENST00000607448 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
LINC01001-203ENST00000607448 TRIM28Q13263 835 aaKnown RBP13.29□□□□□ -0.28
LINC01001-203ENST00000607448 PI4KAP1Q8N8J0 262 aa13.29□□□□□ -0.28
LINC01001-203ENST00000607448 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
LINC01001-203ENST00000607448 ZNF541Q9H0D2 1346 aa13.29□□□□□ -0.28
LINC01001-203ENST00000607448 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
LINC01001-203ENST00000607448 IARSP41252 1262 aaKnown RBP13.28□□□□□ -0.28
LINC01001-203ENST00000607448 PSMD1Q99460 953 aa13.28□□□□□ -0.28
LINC01001-203ENST00000607448 STK31Q9BXU1 1019 aa13.28□□□□□ -0.28
LINC01001-203ENST00000607448 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
LINC01001-203ENST00000607448 KSR2Q6VAB6 950 aa13.28□□□□□ -0.28
LINC01001-203ENST00000607448 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
LINC01001-203ENST00000607448 ATP6V0A2Q9Y487 856 aa13.28□□□□□ -0.28
LINC01001-203ENST00000607448 HSPA6P17066 643 aa13.27□□□□□ -0.29
LINC01001-203ENST00000607448 FLIIQ13045 1269 aa13.27□□□□□ -0.29
LINC01001-203ENST00000607448 GRAPQ13588 217 aa13.27□□□□□ -0.29
LINC01001-203ENST00000607448 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
LINC01001-203ENST00000607448 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.29
LINC01001-203ENST00000607448 ZBTB38Q8NAP3 1195 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-203ENST00000607448 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
LINC01001-203ENST00000607448 PCNTO95613 3336 aa13.27□□□□□ -0.29
LINC01001-203ENST00000607448 DDX58O95786 925 aaKnown RBP13.26□□□□□ -0.29
LINC01001-203ENST00000607448 SF3B3Q15393 1217 aaKnown RBP13.26□□□□□ -0.29
LINC01001-203ENST00000607448 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
LINC01001-203ENST00000607448 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
LINC01001-203ENST00000607448 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
LINC01001-203ENST00000607448 CWC25Q9NXE8 425 aaPredicted RBP13.26□□□□□ -0.29
LINC01001-203ENST00000607448 ADAMTSL1Q8N6G6 1762 aa13.26□□□□□ -0.29
LINC01001-203ENST00000607448 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
LINC01001-203ENST00000607448 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
LINC01001-203ENST00000607448 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
LINC01001-203ENST00000607448 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
LINC01001-203ENST00000607448 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
LINC01001-203ENST00000607448 C16orf71Q8IYS4 520 aaPredicted RBP13.25□□□□□ -0.29
LINC01001-203ENST00000607448 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
LINC01001-203ENST00000607448 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
LINC01001-203ENST00000607448 FZD9O00144 591 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 CT47B1P0C2W7 299 aaPredicted RBP13.24□□□□□ -0.29
LINC01001-203ENST00000607448 AOC3Q16853 763 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 SP8Q8IXZ3 490 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 NEURL1BA8MQ27 555 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 BCAR3O75815 825 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 BBOX1O75936 387 aa13.24□□□□□ -0.29
LINC01001-203ENST00000607448 FKBP5Q13451 457 aaPredicted RBP13.24□□□□□ -0.29
LINC01001-203ENST00000607448 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
LINC01001-203ENST00000607448 F6X3S4 739 aa13.23□□□□□ -0.29
LINC01001-203ENST00000607448 HTRA3P83110 453 aa13.23□□□□□ -0.29
LINC01001-203ENST00000607448 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
LINC01001-203ENST00000607448 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
LINC01001-203ENST00000607448 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
LINC01001-203ENST00000607448 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
LINC01001-203ENST00000607448 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
LINC01001-203ENST00000607448 MPNDQ8N594 471 aa13.22□□□□□ -0.29
LINC01001-203ENST00000607448 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
LINC01001-203ENST00000607448 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
LINC01001-203ENST00000607448 CDHR2Q9BYE9 1310 aa13.22□□□□□ -0.29
LINC01001-203ENST00000607448 PDE8AO60658 829 aa13.21□□□□□ -0.29
LINC01001-203ENST00000607448 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
LINC01001-203ENST00000607448 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
LINC01001-203ENST00000607448 DNAAF4Q8WXU2 420 aa13.21□□□□□ -0.29
LINC01001-203ENST00000607448 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 GPSM2P81274 684 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 FSTL1Q12841 308 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 UBE3BQ7Z3V4 1068 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 PSME4Q14997 1843 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 H7C1W4 665 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 CASP7P55210 303 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 CTSWP56202 376 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 GCKRQ14397 625 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 GPC2Q8N158 579 aa13.2□□□□□ -0.3
LINC01001-203ENST00000607448 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
LINC01001-203ENST00000607448 TAF1DQ9H5J8 278 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms